RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 ANKRD26Q9UPS8 1709 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 C5orf60A6NFR6 353 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 FGRP09769 529 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 C16orf72Q14CZ0 275 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 STXBP2Q15833 593 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 PPP1R15BQ5SWA1 713 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 FAM43BQ6ZT52 329 aaPredicted RBP16.3■□□□□ 0.2
USP43-201ENST00000285199 FAM71AQ8IYT1 594 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 MARK4Q96L34 752 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 NIF3L1Q9GZT8 377 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 PIF1Q9H611 641 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 PCDH9Q9HC56 1237 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 PAIP2BQ9ULR5 123 aaKnown RBP16.3■□□□□ 0.2
USP43-201ENST00000285199 NCANO14594 1321 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 AHCYL1O43865 530 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 CSPG5O95196 566 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 MAP4P27816 1152 aaKnown RBP16.3■□□□□ 0.2
USP43-201ENST00000285199 MLH1P40692 756 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 TMEM62Q0P6H9 643 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 CDC26Q8NHZ8 85 aa16.3■□□□□ 0.2
USP43-201ENST00000285199 SRGAP2BP0DMP2 458 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 NSUN2Q08J23 767 aaKnown RBP eCLIP16.29■□□□□ 0.2
USP43-201ENST00000285199 MMRN1Q13201 1228 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 MPP2Q14168 576 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 ZNF572Q7Z3I7 529 aaPredicted RBP16.29■□□□□ 0.2
USP43-201ENST00000285199 FAM228AQ86W67 206 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 CDKL3Q8IVW4 592 aaPredicted RBP16.29■□□□□ 0.2
USP43-201ENST00000285199 SP8Q8IXZ3 490 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 MOCS2O96007 188 aaPredicted RBP16.29■□□□□ 0.2
USP43-201ENST00000285199 STAT5BP51692 787 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.29■□□□□ 0.2
USP43-201ENST00000285199 GABPB2Q8TAK5 448 aaPredicted RBP16.29■□□□□ 0.2
USP43-201ENST00000285199 SKA2Q8WVK7 121 aaPredicted RBP16.29■□□□□ 0.2
USP43-201ENST00000285199 ATG4CQ96DT6 458 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 KIF12Q96FN5 646 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 WRNIP1Q96S55 665 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 NDNQ99608 321 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 PIDD1Q9HB75 910 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 SIX2Q9NPC8 291 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 SHOC2Q9UQ13 582 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 ATRNO75882 1429 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 E2F6O75461 281 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 RALBP11234 206 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 ANPEPP15144 967 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 RPL22P35268 128 aaKnown RBP16.29■□□□□ 0.2
USP43-201ENST00000285199 XKR3Q5GH77 459 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 PDPK2PQ6A1A2 396 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 CDRT15Q96T59 188 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 SIKE1Q9BRV8 207 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 NACA2Q9H009 215 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 USP18Q9UMW8 372 aa16.29■□□□□ 0.2
USP43-201ENST00000285199 TM9SF1O15321 606 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 PMLP29590 882 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 MAMLD1Q13495 774 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 ZNF483Q8TF39 744 aaPredicted RBP16.28■□□□□ 0.2
USP43-201ENST00000285199 MASTLQ96GX5 879 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 LRMDAQ9H2I8 198 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 SLC5A4Q9NY91 659 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 ITGB3P05106 788 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 PPIDQ08752 370 aaKnown RBP16.28■□□□□ 0.2
USP43-201ENST00000285199 EXOC8Q8IYI6 725 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 SHC3Q92529 594 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 ERLEC1Q96DZ1 483 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 CATSPER2Q96P56 530 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 CADM1Q9BY67 442 aaKnown RBP16.28■□□□□ 0.2
USP43-201ENST00000285199 SAR1AQ9NR31 198 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 ARHGEF3Q9NR81 526 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 PAEPP09466 180 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 ACBD5Q5T8D3 534 aaPredicted RBP16.28■□□□□ 0.2
USP43-201ENST00000285199 RBM15BQ8NDT2 890 aaKnown RBP16.28■□□□□ 0.2
USP43-201ENST00000285199 DNAJC1Q96KC8 554 aaKnown RBP16.28■□□□□ 0.2
USP43-201ENST00000285199 HSD17B14Q9BPX1 270 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 CCDC134Q9H6E4 229 aa16.28■□□□□ 0.2
USP43-201ENST00000285199 TNS2Q63HR2 1409 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 SPDYE16A6NNV3 312 aaPredicted RBP16.27■□□□□ 0.2
USP43-201ENST00000285199 LIASO43766 372 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 AMPD1P23109 780 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 ACSBG2Q5FVE4 666 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 FAM47CQ5HY64 1035 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 MOXD1Q6UVY6 613 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 FAM131BQ86XD5 332 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 SH3TC2Q8TF17 1288 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 RXFP2Q8WXD0 754 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 DTNBP1Q96EV8 351 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 APOPT1Q96IL0 206 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 RNPEPQ9H4A4 650 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 AS3MTQ9HBK9 375 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 SARS2Q9NP81 518 aaKnown RBP16.27■□□□□ 0.2
USP43-201ENST00000285199 STIP1P31948 543 aaKnown RBP16.27■□□□□ 0.2
USP43-201ENST00000285199 CACNB2Q08289 660 aaPredicted RBP16.27■□□□□ 0.2
USP43-201ENST00000285199 ATP1A4Q13733 1029 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 SLC10A5Q5PT55 438 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 HHIPL2Q6UWX4 724 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 ZNF677Q86XU0 584 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 MAGEC3Q8TD91 643 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 ZNF395Q9H8N7 513 aaPredicted RBP16.27■□□□□ 0.2
USP43-201ENST00000285199 IL1RAPL1Q9NZN1 696 aa16.27■□□□□ 0.2
USP43-201ENST00000285199 STX18Q9P2W9 335 aaKnown RBP16.27■□□□□ 0.2
USP43-201ENST00000285199 TMEM59LQ9UK28 342 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms