RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 TIMM50Q3ZCQ8 353 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 SV2CQ496J9 727 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 C2CD6Q53TS8 623 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 OTOAQ7RTW8 1153 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 SLC25A41Q8N5S1 370 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 RNF149Q8NC42 400 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 FBXO36Q8NEA4 188 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9□□□□□ -0.97
SCUBE3-201ENST00000274938 RNF112Q9ULX5 631 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 SNX9Q9Y5X1 595 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 LINC00854A0A1B0GVQ3 168 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 GSG1L2A8MUP6 293 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 UBOX5O94941 541 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 HLA-DRAP01903 254 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 TKTP29401 623 aaKnown RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 CHI3L1P36222 383 aaPredicted RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 TOP3AQ13472 1001 aaPredicted RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 ZRANB3Q5FWF4 1079 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 FIGNQ5HY92 759 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 SNX30Q5VWJ9 437 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 A0A0A6YYK5 440 aaPredicted RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 C1orf232A0A0U1RR37 186 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 F5H6K3 240 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 EXTL3O43909 919 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 IL5RAQ01344 420 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 KLRC3Q07444 240 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 MAD2L1Q13257 205 aaPredicted RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 SGO1Q5FBB7 561 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 LMBRD2Q68DH5 695 aaPredicted RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 IL31Q6EBC2 164 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 KRT77Q7Z794 578 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 C1orf131Q8NDD1 294 aaKnown RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 NCKIPSDQ9NZQ3 722 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 POLG2Q9UHN1 485 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 CRLS1Q9UJA2 301 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 SKAP2O75563 359 aaPredicted RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 RGS7P49802 495 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 XRCC4Q13426 336 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 CCDC80Q76M96 950 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 SH3BP5LQ7L8J4 393 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 ERO1BQ86YB8 467 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 PAFAH2Q99487 392 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 GPR63Q9BZJ6 419 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 INTS13Q9NVM9 706 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 RWDD3Q9Y3V2 267 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 MROH7Q68CQ1 1323 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 ATP7AQ04656 1500 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 SLC2A3P11169 496 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 JAK1P23458 1154 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 YY1P25490 414 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 PCSK1P29120 753 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 TSNQ15631 228 aaKnown RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 SUSD4Q5VX71 490 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 C16orf62Q7Z3J2 963 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 ATG16L2Q8NAA4 619 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 STKLD1Q8NE28 680 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 FAM120BQ96EK7 910 aaKnown RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 MASTLQ96GX5 879 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 C9orf16Q9BUW7 83 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 MCM8Q9UJA3 840 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 DUSP12Q9UNI6 340 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 PLAGL2Q9UPG8 496 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 UBDO15205 165 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 CLOCKO15516 846 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 PEX1O43933 1283 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 MFN2O95140 757 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 IL6P05231 212 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 KCNJ1P48048 391 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 STK4Q13043 487 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 DLG3Q92796 817 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 PPP1R10Q96QC0 940 aaKnown RBP9□□□□□ -0.97
SCUBE3-201ENST00000274938 SAR1AQ9NR31 198 aa9□□□□□ -0.97
SCUBE3-201ENST00000274938 MPOP05164 745 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 KCNT1Q5JUK3 1230 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 ANKRD49Q8WVL7 239 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 MRPL39Q9NYK5 338 aaKnown RBP8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 REREQ9P2R6 1566 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 RPS6KB2Q9UBS0 482 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 MYMKA6NI61 221 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 MAGEB2O15479 319 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 GPR162Q16538 588 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 PCSK7Q16549 785 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 ZNF618Q5T7W0 954 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 GPAT2Q6NUI2 795 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 MZT2BQ6NZ67 158 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 CLVS1Q8IUQ0 354 aaPredicted RBP8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 EID3Q8N140 333 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 FHDC1Q9C0D6 1143 aaPredicted RBP8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 REXO4Q9GZR2 422 aaKnown RBP8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 PIDD1Q9HB75 910 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 RUVBL2Q9Y230 463 aaKnown RBP8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 C15orf38-AP3S2A0A0A6YYH1 394 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 C2orf81A6NN90 581 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 MEI4A8MW99 385 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 NMT2O60551 498 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 PDHBP11177 359 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 CPA3P15088 417 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 CLEC16AQ2KHT3 1053 aa8.99□□□□□ -0.97
SCUBE3-201ENST00000274938 SPDYCQ5MJ68 293 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms