RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ST6GALNAC4Q9H4F1 302 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 PDP2Q9P2J9 529 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 SLC9A2Q9UBY0 812 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 SERPINA10Q9UK55 444 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 PACSIN3Q9UKS6 424 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 AGO2Q9UKV8 859 aaKnown RBP16.6■□□□□ 0.25
LMNB1-201ENST00000261366 SIPA1L1O43166 1804 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
LMNB1-201ENST00000261366 YDJCA8MPS7 323 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 CXorf49A8MYA2 514 aaPredicted RBP16.6■□□□□ 0.25
LMNB1-201ENST00000261366 F5H423 210 aaPredicted RBP16.6■□□□□ 0.25
LMNB1-201ENST00000261366 ZNF862O60290 1169 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 C4BPAP04003 597 aaKnown RBP16.6■□□□□ 0.25
LMNB1-201ENST00000261366 AP2B1P63010 937 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 RALGPS1Q5JS13 557 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 SWSAP1Q6NVH7 229 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 DPH6Q7L8W6 267 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 CCDC33Q8N5R6 958 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 ZFAND2BQ8WV99 257 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 NKD2Q969F2 451 aaPredicted RBP16.6■□□□□ 0.25
LMNB1-201ENST00000261366 NDNQ99608 321 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 APOL6Q9BWW8 343 aa16.6■□□□□ 0.25
LMNB1-201ENST00000261366 LRRIQ4A6NIV6 560 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 OR6B1O95007 311 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 C6orf222P0C671 652 aaPredicted RBP16.59■□□□□ 0.25
LMNB1-201ENST00000261366 RBP3P10745 1247 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 EIF3EP60228 445 aaKnown RBP16.59■□□□□ 0.25
LMNB1-201ENST00000261366 C1QBPQ07021 282 aaKnown RBP16.59■□□□□ 0.25
LMNB1-201ENST00000261366 MMRN1Q13201 1228 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 CIAPIN1Q6FI81 312 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 C4orf19Q8IY42 314 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 NMD3Q96D46 503 aaKnown RBP16.59■□□□□ 0.25
LMNB1-201ENST00000261366 MRIQ9BWK5 157 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 STRIP2Q9ULQ0 834 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 RBBP6Q7Z6E9 1792 aaKnown RBP16.59■□□□□ 0.25
LMNB1-201ENST00000261366 WDR64B1ANS9 1081 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 DNAJC6O75061 913 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 TOM1L1O75674 476 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 CST3P01034 146 aaPredicted RBP16.59■□□□□ 0.25
LMNB1-201ENST00000261366 CD19P15391 556 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 RPS6P62753 249 aaKnown RBP16.59■□□□□ 0.25
LMNB1-201ENST00000261366 KRT72Q14CN4 511 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 SPDYAQ5MJ70 313 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 E2F7Q96AV8 911 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 ALKBH8Q96BT7 664 aaKnown RBP16.59■□□□□ 0.25
LMNB1-201ENST00000261366 TARS2Q9BW92 718 aaKnown RBP16.59■□□□□ 0.25
LMNB1-201ENST00000261366 HAPLN2Q9GZV7 340 aa16.59■□□□□ 0.25
LMNB1-201ENST00000261366 POLR3FQ9H1D9 316 aaPredicted RBP16.59■□□□□ 0.25
LMNB1-201ENST00000261366 E2F8A0AVK6 867 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 LYPLA1O75608 230 aaPredicted RBP16.58■□□□□ 0.25
LMNB1-201ENST00000261366 RAD17O75943 681 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 PGM3O95394 542 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 PDE1BQ01064 536 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 MROH9Q5TGP6 573 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 DRICH1Q6PGQ1 229 aaPredicted RBP16.58■□□□□ 0.25
LMNB1-201ENST00000261366 C15orf39Q6ZRI6 1047 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 RSPH3Q86UC2 560 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 NUDCD3Q8IVD9 361 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 KCTD6Q8NC69 237 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 DHRS4Q9BTZ2 278 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 SPATA16Q9BXB7 569 aa16.58■□□□□ 0.25
LMNB1-201ENST00000261366 A8MXQ7 604 aa16.58■□□□□ 0.24
LMNB1-201ENST00000261366 ZMPSTE24O75844 475 aa16.58■□□□□ 0.24
LMNB1-201ENST00000261366 NCOA4Q13772 614 aa16.58■□□□□ 0.24
LMNB1-201ENST00000261366 LRRC23Q53EV4 343 aaPredicted RBP16.58■□□□□ 0.24
LMNB1-201ENST00000261366 DARS2Q6PI48 645 aaKnown RBP16.58■□□□□ 0.24
LMNB1-201ENST00000261366 TMEM130Q8N3G9 435 aa16.58■□□□□ 0.24
LMNB1-201ENST00000261366 PPP1R14CQ8TAE6 165 aa16.58■□□□□ 0.24
LMNB1-201ENST00000261366 SPATA18Q8TC71 538 aa16.58■□□□□ 0.24
LMNB1-201ENST00000261366 RMDN3Q96TC7 470 aa16.58■□□□□ 0.24
LMNB1-201ENST00000261366 SSU72Q9NP77 194 aaKnown RBP16.58■□□□□ 0.24
LMNB1-201ENST00000261366 CLIC5Q9NZA1 410 aa16.58■□□□□ 0.24
LMNB1-201ENST00000261366 LOC100653049A0A140TA62 436 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 EXTL3O43909 919 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 STAM2O75886 525 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 KRT34O76011 436 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 ASPHQ12797 758 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 LIN52Q52LA3 116 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 SFT2D3Q587I9 215 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 C1orf228Q6PIY5 440 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 TRIM72Q6ZMU5 477 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 PCGF5Q86SE9 256 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 ZBTB33Q86T24 672 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 APLFQ8IW19 511 aaPredicted RBP16.57■□□□□ 0.24
LMNB1-201ENST00000261366 KIAA0319LQ8IZA0 1049 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 SYTL5Q8TDW5 730 aaPredicted RBP16.57■□□□□ 0.24
LMNB1-201ENST00000261366 FAF2Q96CS3 445 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 MMADHCQ9H3L0 296 aaPredicted RBP16.57■□□□□ 0.24
LMNB1-201ENST00000261366 UBIAD1Q9Y5Z9 338 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 CCDC160A6NGH7 325 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 ZC3H11AO75152 810 aaKnown RBP eCLIP16.57■□□□□ 0.245e-20■■□□□ 11.5
LMNB1-201ENST00000261366 TM7SF2O76062 418 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 ITGBL1O95965 494 aaPredicted RBP16.57■□□□□ 0.24
LMNB1-201ENST00000261366 DHRS4L1P0CG22 281 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 SERPINB6P35237 376 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 SNRPFP62306 86 aaKnown RBP16.57■□□□□ 0.24
LMNB1-201ENST00000261366 DENND5BQ6ZUT9 1274 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 XPNPEP1Q9NQW7 623 aa16.57■□□□□ 0.24
LMNB1-201ENST00000261366 TBC1D22BQ9NU19 505 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms