RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 PLEKHA8Q96JA3 519 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 ERAP1Q9NZ08 941 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 WWOXQ9NZC7 414 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 H2AFY2Q9P0M6 372 aaPredicted RBP13.84□□□□□ -0.19
NEK4-201ENST00000233027 EARS2Q5JPH6 523 aaKnown RBP13.84□□□□□ -0.19
NEK4-201ENST00000233027 AGAP9Q5VTM2 703 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 UNC45BQ8IWX7 931 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 KIAA0895Q8NCT3 520 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 RBM46Q8TBY0 533 aaKnown RBP13.84□□□□□ -0.19
NEK4-201ENST00000233027 CINPQ9BW66 212 aaPredicted RBP13.84□□□□□ -0.19
NEK4-201ENST00000233027 ABI2Q9NYB9 513 aaPredicted RBP13.84□□□□□ -0.19
NEK4-201ENST00000233027 SEPT3Q9UH03 358 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 LSM7Q9UK45 103 aaKnown RBP13.84□□□□□ -0.19
NEK4-201ENST00000233027 NAALADL1Q9UQQ1 740 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 NR5A2O00482 541 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 IMPDH2P12268 514 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 DDX5P17844 614 aaKnown RBP13.84□□□□□ -0.19
NEK4-201ENST00000233027 BOLA3Q53S33 107 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 STRA8Q7Z7C7 330 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 KLHL4Q9C0H6 718 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 SLC7A5P2Q9GIP4 190 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 O00370 1275 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 EFCAB14O75071 495 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 STX5Q13190 355 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 PCNX4Q63HM2 1172 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 TRAF7Q6Q0C0 670 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 TAS1R2Q8TE23 839 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 USP6NLQ92738 828 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 RXFP1Q9HBX9 757 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 SELENONQ9NZV5 590 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 USP18Q9UMW8 372 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 SDR42E2A6NKP2 422 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 HBP1O60381 514 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 KRT75O95678 551 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 CDC42EP1Q00587 391 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 PKN1Q16512 942 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 CENPPQ6IPU0 288 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 RBBP8Q99708 897 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 SLC38A7Q9NVC3 462 aa13.84□□□□□ -0.19
NEK4-201ENST00000233027 EVPLLA8MZ36 301 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 RNF103O00237 685 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 TAF6P49848 677 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 OASLQ15646 514 aaKnown RBP13.83□□□□□ -0.2
NEK4-201ENST00000233027 NOTUMQ6P988 496 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 CCDC103Q8IW40 242 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 ACER1Q8TDN7 264 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 PPP1R2P1Q96PQ5 205 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 RERGLQ9H628 205 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 LINC00854A0A1B0GVQ3 168 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 SOAT2O75908 522 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 PYGMP11217 842 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 CYP2B6P20813 491 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 PSMC6P62333 389 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 SNX17Q15036 470 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 TRMT6Q9UJA5 497 aaKnown RBP13.83□□□□□ -0.2
NEK4-201ENST00000233027 PCDHB8Q9UN66 801 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 CAMSAP1Q5T5Y3 1602 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 PRRG1O14668 218 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 ANXA9O76027 345 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 CCDC15Q0P6D6 951 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 FIGNQ5HY92 759 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 FAM117BQ6P1L5 589 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 PHF21AQ96BD5 680 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 KAZALD1Q96I82 304 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 KATNAL1Q9BW62 490 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 GIMAP4Q9NUV9 329 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 PTPRMP28827 1452 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 A0A0A6YYK5 440 aaPredicted RBP13.83□□□□□ -0.2
NEK4-201ENST00000233027 PIK3CDO00329 1044 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 WBP4O75554 376 aaKnown RBP13.83□□□□□ -0.2
NEK4-201ENST00000233027 SERPINI2O75830 405 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 APOA4P06727 396 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 DEFA1P59665 94 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 DEFA3P59666 94 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 SEL1L3Q68CR1 1132 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 CENPLQ8N0S6 344 aaPredicted RBP13.83□□□□□ -0.2
NEK4-201ENST00000233027 GLMNQ92990 594 aa13.83□□□□□ -0.2
NEK4-201ENST00000233027 ZC3H13Q5T200 1668 aaKnown RBP13.83□□□□□ -0.2
NEK4-201ENST00000233027 HEATR9A2RTY3 570 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 HNRNPRO43390 633 aaKnown RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 H2AFYO75367 372 aaKnown RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 ALDH1A1P00352 501 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 ICAM1P05362 532 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 PCSK1P29120 753 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 RPL21P46778 160 aaKnown RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 TRIM16LQ309B1 348 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 HIC2Q96JB3 615 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 CEP41Q9BYV8 373 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 EFCAB1Q9HAE3 211 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 PIH1D1Q9NWS0 290 aaKnown RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 SPASTQ9UBP0 616 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 CRLS1Q9UJA2 301 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 CAB39Q9Y376 341 aaPredicted RBP13.82□□□□□ -0.2
NEK4-201ENST00000233027 VWA5AO00534 786 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 CRYMQ14894 314 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 ARHGEF19Q8IW93 802 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 TATDN2Q93075 761 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 GGA3Q9NZ52 723 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 UBP1Q9NZI7 540 aa13.82□□□□□ -0.2
NEK4-201ENST00000233027 RALBP11234 206 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms