RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C YLR363W-AQ3E747 85 aa1.82□□□□□ -2.12
SCL1YGL011C SRP21P32342 167 aa1.81□□□□□ -2.12
SCL1YGL011C YBR090CP38253 122 aa1.81□□□□□ -2.12
SCL1YGL011C YNL198CP40166 100 aa1.81□□□□□ -2.12
SCL1YGL011C YJL218WP40892 196 aaKnown RBP1.81□□□□□ -2.12
SCL1YGL011C YGL230CP53074 147 aa1.81□□□□□ -2.12
SCL1YGL011C NMA1Q06178 401 aaKnown RBP1.81□□□□□ -2.12
SCL1YGL011C MHF2Q3E829 80 aa1.81□□□□□ -2.12
SCL1YGL011C HKR1P41809 1802 aa1.81□□□□□ -2.12
SCL1YGL011C ECM29P38737 1868 aa1.81□□□□□ -2.12
SCL1YGL011C APC1P53886 1748 aa1.8□□□□□ -2.12
SCL1YGL011C ECM12O13529 151 aa1.8□□□□□ -2.12
SCL1YGL011C PAU19P0CE85 124 aa1.8□□□□□ -2.12
SCL1YGL011C PAU21P0CE86 164 aa1.8□□□□□ -2.12
SCL1YGL011C PAU22P0CE87 164 aa1.8□□□□□ -2.12
SCL1YGL011C PAU3P25610 124 aa1.8□□□□□ -2.12
SCL1YGL011C YCR099CP25657 155 aa1.8□□□□□ -2.12
SCL1YGL011C HTD2P38790 280 aaKnown RBP1.8□□□□□ -2.12
SCL1YGL011C YAR029WP39549 74 aa1.8□□□□□ -2.12
SCL1YGL011C CCS1P40202 249 aaKnown RBP1.8□□□□□ -2.12
SCL1YGL011C HUA1P40325 198 aa1.8□□□□□ -2.12
SCL1YGL011C PAU5P43575 122 aa1.8□□□□□ -2.12
SCL1YGL011C MPC1P53157 130 aaKnown RBP1.8□□□□□ -2.12
SCL1YGL011C YML079WQ03629 201 aa1.8□□□□□ -2.12
SCL1YGL011C RAF1Q06891 181 aa1.8□□□□□ -2.12
SCL1YGL011C FIT3Q08907 204 aa1.8□□□□□ -2.12
SCL1YGL011C PRM3Q08931 133 aa1.8□□□□□ -2.12
SCL1YGL011C YDL157CQ12082 118 aa1.8□□□□□ -2.12
SCL1YGL011C DAD1Q12248 94 aa1.8□□□□□ -2.12
SCL1YGL011C YMR030W-AQ3E760 96 aa1.8□□□□□ -2.12
SCL1YGL011C UBC5P15732 148 aa1.79□□□□□ -2.12
SCL1YGL011C MAK31P23059 88 aa1.79□□□□□ -2.12
SCL1YGL011C YKR070WP36151 352 aaKnown RBP1.79□□□□□ -2.12
SCL1YGL011C APQ12P40532 138 aa1.79□□□□□ -2.12
SCL1YGL011C EMC4P53073 190 aa1.79□□□□□ -2.12
SCL1YGL011C LSM3P57743 89 aaKnown RBP1.79□□□□□ -2.12
SCL1YGL011C EST3Q03096 181 aa1.79□□□□□ -2.12
SCL1YGL011C GPI19Q04082 140 aa1.79□□□□□ -2.12
SCL1YGL011C YLR146W-AQ2V2P1 62 aa1.79□□□□□ -2.12
SCL1YGL011C KTI11Q3E840 82 aa1.79□□□□□ -2.12
SCL1YGL011C SCS22Q6Q595 175 aa1.79□□□□□ -2.12
SCL1YGL011C STT4P37297 1900 aa1.79□□□□□ -2.12
SCL1YGL011C NHP2P32495 156 aaPredicted RBP1.78□□□□□ -2.12
SCL1YGL011C YRA2P36036 203 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
SCL1YGL011C RPL14AP36105 138 aaKnown RBP1.78□□□□□ -2.12
SCL1YGL011C YEL028WP39989 153 aa1.78□□□□□ -2.12
SCL1YGL011C CYB5P40312 120 aa1.78□□□□□ -2.12
SCL1YGL011C SFT1P43682 97 aa1.78□□□□□ -2.12
SCL1YGL011C GEP7P53171 287 aa1.78□□□□□ -2.12
SCL1YGL011C YMR090WQ04304 227 aaKnown RBP1.78□□□□□ -2.12
SCL1YGL011C YMR103CQ04436 120 aa1.78□□□□□ -2.12
SCL1YGL011C KEI1Q06346 221 aa1.78□□□□□ -2.12
SCL1YGL011C SYM1Q06563 197 aa1.78□□□□□ -2.12
SCL1YGL011C RRT7Q07829 113 aa1.78□□□□□ -2.12
SCL1YGL011C YIL102C-AQ2V2P5 75 aa1.78□□□□□ -2.12
SCL1YGL011C COX19Q3E731 98 aa1.78□□□□□ -2.12
SCL1YGL011C YCR050CP25630 102 aa1.77□□□□□ -2.13
SCL1YGL011C PAU16P35994 123 aa1.77□□□□□ -2.13
SCL1YGL011C HSP10P38910 106 aa1.77□□□□□ -2.13
SCL1YGL011C YEL073CP39974 107 aa1.77□□□□□ -2.13
SCL1YGL011C RPL37AP49166 88 aaKnown RBP1.77□□□□□ -2.13
SCL1YGL011C YMR007WQ03675 126 aa1.77□□□□□ -2.13
SCL1YGL011C YMR082CQ04276 118 aa1.77□□□□□ -2.13
SCL1YGL011C LAA1P39526 2014 aa1.76□□□□□ -2.13
SCL1YGL011C YCR085WP25650 117 aa1.76□□□□□ -2.13
SCL1YGL011C YBR292CP38357 123 aa1.76□□□□□ -2.13
SCL1YGL011C HPA2Q06592 156 aa1.76□□□□□ -2.13
SCL1YGL011C FCY1Q12178 158 aa1.76□□□□□ -2.13
SCL1YGL011C YNL277W-AQ3E7Z0 62 aa1.76□□□□□ -2.13
SCL1YGL011C ENV10Q99382 181 aa1.76□□□□□ -2.13
SCL1YGL011C MIC27P50945 234 aa1.75□□□□□ -2.13
SCL1YGL011C YDR042CQ03205 200 aa1.75□□□□□ -2.13
SCL1YGL011C POC4Q12245 148 aaPredicted RBP1.75□□□□□ -2.13
SCL1YGL011C YOR097CQ12274 175 aaPredicted RBP1.75□□□□□ -2.13
SCL1YGL011C RPL30P14120 105 aaKnown RBP1.74□□□□□ -2.13
SCL1YGL011C YHR140WP38842 239 aa1.74□□□□□ -2.13
SCL1YGL011C YER181CP40097 107 aa1.74□□□□□ -2.13
SCL1YGL011C PHS1P40857 217 aa1.74□□□□□ -2.13
SCL1YGL011C YDR119W-AQ2V2P9 66 aa1.74□□□□□ -2.13
SCL1YGL011C PAU1P0CE88 120 aa1.73□□□□□ -2.13
SCL1YGL011C PAU14P0CE89 120 aa1.73□□□□□ -2.13
SCL1YGL011C PAU6P0CE90 120 aa1.73□□□□□ -2.13
SCL1YGL011C PAU18P0CE91 120 aa1.73□□□□□ -2.13
SCL1YGL011C PAU8P0CE92 120 aa1.73□□□□□ -2.13
SCL1YGL011C PAU11P0CE93 120 aa1.73□□□□□ -2.13
SCL1YGL011C RPA12P32529 125 aaKnown RBP1.73□□□□□ -2.13
SCL1YGL011C PAU2P32612 120 aa1.73□□□□□ -2.13
SCL1YGL011C PAU24P38155 120 aa1.73□□□□□ -2.13
SCL1YGL011C PAU13P38725 120 aa1.73□□□□□ -2.13
SCL1YGL011C FIP1P45976 327 aa1.73□□□□□ -2.13
SCL1YGL011C PAU12P53343 120 aa1.73□□□□□ -2.13
SCL1YGL011C PAU4P53427 120 aa1.73□□□□□ -2.13
SCL1YGL011C YNR064CP53750 290 aa1.73□□□□□ -2.13
SCL1YGL011C PAU10Q03050 120 aa1.73□□□□□ -2.13
SCL1YGL011C PAU20Q08322 120 aa1.73□□□□□ -2.13
SCL1YGL011C YOR385WQ08909 290 aa1.73□□□□□ -2.13
SCL1YGL011C PAU9Q3E770 120 aa1.73□□□□□ -2.13
SCL1YGL011C YOR376W-AQ3E805 51 aa1.73□□□□□ -2.13
SCL1YGL011C YFL041W-AQ3E817 63 aa1.73□□□□□ -2.13
SCL1YGL011C KSH1Q8TGJ3 72 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms