RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	MPC2	P38857	129 aa		0.28	□□□□□ -2.36
SWF1	YDR126W	EMC5	P40540	141 aa		0.28	□□□□□ -2.36
SWF1	YDR126W	YIR020C	P40575	100 aa		0.28	□□□□□ -2.36
SWF1	YDR126W	PAU15	P40585	124 aa		0.28	□□□□□ -2.36
SWF1	YDR126W	BUD4	P47136	1447 aa		0.28	□□□□□ -2.37
SWF1	YDR126W	YLR419W	Q06698	1435 aa	Known RBP	0.28	□□□□□ -2.37
SWF1	YDR126W	CCW14	O13547	238 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	YCR101C	P25607	182 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	PAU2	P32612	120 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	PAU16	P35994	123 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	PAU24	P38155	120 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	YBR090C	P38253	122 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	AIM19	P40502	157 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	MIX14	Q04341	121 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	YMR103C	Q04436	120 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	PAU20	Q08322	120 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	YCR095W-A	Q3E787	52 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	TOP2	P06786	1428 aa	Known RBP	0.27	□□□□□ -2.37
SWF1	YDR126W	SRB8	P25648	1427 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	TAO3	P40468	2376 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	GEA1	P47102	1408 aa	Predicted RBP	0.27	□□□□□ -2.37
SWF1	YDR126W	GEA2	P39993	1459 aa	Known RBP	0.27	□□□□□ -2.37
SWF1	YDR126W	TY4B-H	P0C2J7	1802 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	GSC2	P40989	1895 aa		0.27	□□□□□ -2.37
SWF1	YDR126W	YLR255C	O13574	117 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	YER039C-A	P0CD97	72 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	UBC4	P15731	148 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	UBC5	P15732	148 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	BUD23	P25627	275 aa	Predicted RBP	0.26	□□□□□ -2.37
SWF1	YDR126W	NHP2	P32495	156 aa	Predicted RBP	0.26	□□□□□ -2.37
SWF1	YDR126W	GCV3	P39726	170 aa	Predicted RBP	0.26	□□□□□ -2.37
SWF1	YDR126W	SNU13	P39990	126 aa	Known RBP	0.26	□□□□□ -2.37
SWF1	YDR126W	YER137C	P40083	148 aa	Known RBP	0.26	□□□□□ -2.37
SWF1	YDR126W	MRPS12	P53732	153 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	MRX7	P53869	86 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	ICY1	Q04329	127 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	ZEO1	Q08245	113 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	FYV7	Q12247	151 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	YOL164W-A	Q3E7A5	60 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	YKL068W-A	Q3E826	78 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	LYS2	P07702	1392 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	CAT8	P39113	1433 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	TSC11	P40061	1430 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	TY1B-H	O13535	1793 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	YRF1-6	P53819	1859 aa		0.26	□□□□□ -2.37
SWF1	YDR126W	SEC7	P11075	2009 aa	Known RBP	0.25	□□□□□ -2.37
SWF1	YDR126W	BNI1	P41832	1953 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	PAU1	P0CE88	120 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	PAU14	P0CE89	120 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	PAU6	P0CE90	120 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	PAU18	P0CE91	120 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	PAU8	P0CE92	120 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	PAU11	P0CE93	120 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	PAU13	P38725	120 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	YHL005C	P38752	130 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	RPL38	P49167	78 aa	Known RBP	0.25	□□□□□ -2.37
SWF1	YDR126W	RSM19	P53733	91 aa	Predicted RBP	0.25	□□□□□ -2.37
SWF1	YDR126W	PAU10	Q03050	120 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	PAU9	Q3E770	120 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	SUS1	Q6WNK7	96 aa		0.25	□□□□□ -2.37
SWF1	YDR126W	REV3	P14284	1504 aa		0.24	□□□□□ -2.37
SWF1	YDR126W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.24	□□□□□ -2.37
SWF1	YDR126W	SSN2	P38931	1420 aa		0.24	□□□□□ -2.37
SWF1	YDR126W	KRE5	P22023	1365 aa		0.24	□□□□□ -2.37
SWF1	YDR126W	RPS11A	P0CX47	156 aa	Known RBP	0.24	□□□□□ -2.37
SWF1	YDR126W	RPS11B	P0CX48	156 aa	Known RBP	0.24	□□□□□ -2.37
SWF1	YDR126W	ROX3	P25046	220 aa		0.24	□□□□□ -2.37
SWF1	YDR126W	AUA1	P32450	94 aa		0.24	□□□□□ -2.37
SWF1	YDR126W	YNL198C	P40166	100 aa		0.24	□□□□□ -2.37
SWF1	YDR126W	PAU4	P53427	120 aa		0.24	□□□□□ -2.37
SWF1	YDR126W	YDR029W	Q12111	104 aa		0.24	□□□□□ -2.37
SWF1	YDR126W	MHF2	Q3E829	80 aa		0.24	□□□□□ -2.37
SWF1	YDR126W	MIC10	Q96VH5	97 aa		0.24	□□□□□ -2.37
SWF1	YDR126W	POL2	P21951	2222 aa	Known RBP	0.23	□□□□□ -2.37
SWF1	YDR126W	FAS2	P19097	1887 aa	Known RBP	0.23	□□□□□ -2.37
SWF1	YDR126W	HMRA1	P0CY11	126 aa		0.23	□□□□□ -2.37
SWF1	YDR126W	COX7	P10174	60 aa		0.23	□□□□□ -2.37
SWF1	YDR126W	RSM18	P40033	138 aa		0.23	□□□□□ -2.37
SWF1	YDR126W	MSL1	P40567	111 aa	Predicted RBP	0.23	□□□□□ -2.37
SWF1	YDR126W	YNL190W	P53872	204 aa		0.23	□□□□□ -2.37
SWF1	YDR126W	YPL225W	Q08971	146 aa	Known RBP	0.23	□□□□□ -2.37
SWF1	YDR126W	MYO1	P08964	1928 aa		0.23	□□□□□ -2.37
SWF1	YDR126W	PDR11	P40550	1411 aa		0.22	□□□□□ -2.37
SWF1	YDR126W	RSF2	P46974	1380 aa		0.22	□□□□□ -2.37
SWF1	YDR126W	NTE1	Q04958	1679 aa		0.22	□□□□□ -2.37
SWF1	YDR126W	RPA12	P32529	125 aa	Known RBP	0.22	□□□□□ -2.37
SWF1	YDR126W	TOM6	P33448	61 aa		0.22	□□□□□ -2.37
SWF1	YDR126W	MRPL38	P35996	138 aa	Predicted RBP	0.22	□□□□□ -2.37
SWF1	YDR126W	YBL071C	P38185	102 aa		0.22	□□□□□ -2.37
SWF1	YDR126W	BSC4	P53841	131 aa		0.22	□□□□□ -2.37
SWF1	YDR126W	YDR210W	Q03482	75 aa		0.22	□□□□□ -2.37
SWF1	YDR126W	YNR034W-A	Q3E841	98 aa		0.22	□□□□□ -2.37
SWF1	YDR126W	KSH1	Q8TGJ3	72 aa		0.22	□□□□□ -2.37
SWF1	YDR126W	URB1	P34241	1764 aa	Known RBP	0.22	□□□□□ -2.37
SWF1	YDR126W	BPT1	P14772	1559 aa		0.21	□□□□□ -2.38
SWF1	YDR126W	YJR107C-A	P0CT86	78 aa		0.21	□□□□□ -2.38
SWF1	YDR126W	YHR214C-D	P0CX93	97 aa		0.21	□□□□□ -2.38
SWF1	YDR126W	PAU5	P43575	122 aa		0.21	□□□□□ -2.38
SWF1	YDR126W	YOR289W	Q12012	251 aa	Predicted RBP	0.21	□□□□□ -2.38
SWF1	YDR126W	YNL042W-B	Q3E7Z2	85 aa		0.21	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms