RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 CHRNB1P11230 501 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 CCDC130P13994 396 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 ANXA13P27216 316 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 HOXC13P31276 330 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 ZXDBP98169 803 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 CSTF1Q05048 431 aaKnown RBP18.87■□□□□ 0.61
PNKP-230ENST00000638016 FAM160A1Q05DH4 1040 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 PON2Q15165 354 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 ISM2Q6H9L7 571 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 Q6ZS52 159 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 DENND5BQ6ZUT9 1274 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 ACOT1Q86TX2 421 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 FAM35AQ86V20 835 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 NKD2Q969F2 451 aaPredicted RBP18.87■□□□□ 0.61
PNKP-230ENST00000638016 TWNKQ96RR1 684 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 KCNK16Q96T55 309 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 NELL2Q99435 816 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 FAM83CQ9BQN1 747 aa18.87■□□□□ 0.61
PNKP-230ENST00000638016 EP300Q09472 2414 aaPredicted RBP18.86■□□□□ 0.61
PNKP-230ENST00000638016 TRIM49BA6NDI0 452 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 TRIM66O15016 1216 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 CKMP06732 381 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 FAM163BP0C2L3 166 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 DDX6P26196 483 aaKnown RBP eCLIP18.86■□□□□ 0.61
PNKP-230ENST00000638016 RPS9P46781 194 aaKnown RBP18.86■□□□□ 0.61
PNKP-230ENST00000638016 NDST1P52848 882 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 SGSM1Q2NKQ1 1148 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 C8orf48Q96LL4 319 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 ELOVL4Q9GZR5 314 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 CHRDQ9H2X0 955 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 FAM49BQ9NUQ9 324 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 C2orf42Q9NWW7 574 aa18.86■□□□□ 0.61
PNKP-230ENST00000638016 GVINP1Q7Z2Y8 2422 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 TRAV19A0A0A6YYK7 116 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 SCAMP3O14828 347 aaKnown RBP18.85■□□□□ 0.61
PNKP-230ENST00000638016 IKBKBO14920 756 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 MAPK13O15264 365 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 PSMC2P35998 433 aaKnown RBP18.85■□□□□ 0.61
PNKP-230ENST00000638016 NOP14P78316 857 aaKnown RBP18.85■□□□□ 0.61
PNKP-230ENST00000638016 USP4Q13107 963 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 MTF1Q14872 753 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 ZNF77Q15935 545 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 ZNF658Q5TYW1 1059 aaPredicted RBP18.85■□□□□ 0.61
PNKP-230ENST00000638016 INTS8Q75QN2 995 aaKnown RBP18.85■□□□□ 0.61
PNKP-230ENST00000638016 FUKQ8N0W3 1084 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 C12orf29Q8N999 325 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 SEMA4DQ92854 862 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 MED10Q9BTT4 135 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 TTLL2Q9BWV7 592 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 WNT6Q9Y6F9 365 aa18.85■□□□□ 0.61
PNKP-230ENST00000638016 NCAM2O15394 837 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 BEST1O76090 585 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 KRT13P13646 458 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 PLCB2Q00722 1185 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 TAF10Q12962 218 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 ITPRIPL2Q3MIP1 535 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 ANKRD40Q6AI12 368 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 ZMIZ2Q8NF64 920 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 SCAMP5Q8TAC9 235 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 SPATA20Q8TB22 786 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 SH3RF2Q8TEC5 729 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 SMARCE1Q969G3 411 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 RNF38Q9H0F5 515 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 C8orf33Q9H7E9 229 aaPredicted RBP18.84■□□□□ 0.61
PNKP-230ENST00000638016 KIF9Q9HAQ2 790 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 PRMT8Q9NR22 394 aaPredicted RBP18.84■□□□□ 0.61
PNKP-230ENST00000638016 KRT82Q9NSB4 513 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 THG1LQ9NWX6 298 aaKnown RBP18.84■□□□□ 0.61
PNKP-230ENST00000638016 OTOGLQ3ZCN5 2332 aa18.84■□□□□ 0.61
PNKP-230ENST00000638016 ZNF840PA6NDX5 716 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 ABL1P00519 1130 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 USP17L7P0C7H9 530 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 CD44P16070 742 aaKnown RBP18.83■□□□□ 0.6
PNKP-230ENST00000638016 HDCP19113 662 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 CD58P19256 250 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 RPL13P26373 211 aaKnown RBP18.83■□□□□ 0.6
PNKP-230ENST00000638016 MAGEA9P43362 315 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 SATB1Q01826 763 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 RUNX3Q13761 415 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 ZNF268Q14587 947 aaPredicted RBP18.83■□□□□ 0.6
PNKP-230ENST00000638016 EDRF1Q3B7T1 1238 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 RALGPS2Q86X27 583 aaPredicted RBP18.83■□□□□ 0.6
PNKP-230ENST00000638016 SLC2A14Q8TDB8 520 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 GSDMAQ96QA5 445 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 SMOQ99835 787 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 RMND1Q9NWS8 449 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 SMPD4Q9NXE4 827 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 TRPM5Q9NZQ8 1165 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 ZMYM5Q9UJ78 669 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 MAN1B1Q9UKM7 699 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 MYO16Q9Y6X6 1858 aa18.83■□□□□ 0.6
PNKP-230ENST00000638016 AP1G2O75843 785 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 ADORA2BP29275 332 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 PGFP49763 221 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 SLC5A3P53794 718 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 PKN3Q6P5Z2 889 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 ADSSL1Q8N142 457 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 WHAMMQ8TF30 809 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 TAF4BQ92750 862 aa18.82■□□□□ 0.6
PNKP-230ENST00000638016 CCDC34Q96HJ3 373 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms