RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 NDST1P52848 882 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 FKBP3Q00688 224 aaKnown RBP14.68□□□□□ -0.06
PNKP-228ENST00000637325 IFRD2Q12894 506 aaPredicted RBP14.68□□□□□ -0.06
PNKP-228ENST00000637325 COBLL1Q53SF7 1204 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 TCERG1LQ5VWI1 586 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 KRT39Q6A163 491 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 ANKRD40Q6AI12 368 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 C1orf228Q6PIY5 440 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 ACOT1Q86TX2 421 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 TTC16Q8NEE8 873 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 TTC8Q8TAM2 541 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 SPATA20Q8TB22 786 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 USP13Q92995 863 aaPredicted RBP14.68□□□□□ -0.06
PNKP-228ENST00000637325 MSANTD3Q96H12 275 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 DNAI2Q9GZS0 605 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 CHMP5Q9NZZ3 219 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 CCL26Q9Y258 94 aa14.68□□□□□ -0.06
PNKP-228ENST00000637325 ZFHX2Q9C0A1 2572 aaPredicted RBP14.67□□□□□ -0.06
PNKP-228ENST00000637325 ARNTLO00327 626 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 PSMA7O14818 248 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 LAMTOR5O43504 91 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 ABL1P00519 1130 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 HDCP19113 662 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 PPP1R2P41236 205 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 PPP3CCP48454 512 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 MXI1P50539 228 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 PDE6CP51160 858 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 MLLT6P55198 1093 aaPredicted RBP14.67□□□□□ -0.06
PNKP-228ENST00000637325 USP46P62068 366 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 NOP14P78316 857 aaKnown RBP14.67□□□□□ -0.06
PNKP-228ENST00000637325 ORC1Q13415 861 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 ZNF268Q14587 947 aaPredicted RBP14.67□□□□□ -0.06
PNKP-228ENST00000637325 DCAF17Q5H9S7 520 aaPredicted RBP14.67□□□□□ -0.06
PNKP-228ENST00000637325 UNC93AQ86WB7 457 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 ADSSL1Q8N142 457 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 NUP93Q8N1F7 819 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 ARL14EPQ8N8R7 260 aaPredicted RBP14.67□□□□□ -0.06
PNKP-228ENST00000637325 TAS1R2Q8TE23 839 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 CLDN23Q96B33 292 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 SMARCD1Q96GM5 515 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 SLITRK1Q96PX8 696 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 CYP2S1Q96SQ9 504 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 CYP3A43Q9HB55 503 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 GKN1Q9NS71 199 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 GTSE1Q9NYZ3 720 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 MAN1B1Q9UKM7 699 aa14.67□□□□□ -0.06
PNKP-228ENST00000637325 SLC16A3O15427 465 aaKnown RBP14.66□□□□□ -0.06
PNKP-228ENST00000637325 AP1G2O75843 785 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 RTN3O95197 1032 aaPredicted RBP14.66□□□□□ -0.06
PNKP-228ENST00000637325 YWHAQP27348 245 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 ANP32AP39687 249 aaKnown RBP14.66□□□□□ -0.06
PNKP-228ENST00000637325 NBL1P41271 181 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 ASPAP45381 313 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 RPS9P46781 194 aaKnown RBP14.66□□□□□ -0.06
PNKP-228ENST00000637325 SOX9P48436 509 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 CACNA2D1P54289 1103 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 LRRC63Q05C16 580 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 TNK2Q07912 1038 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 ITPRIPL2Q3MIP1 535 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 WDR44Q5JSH3 913 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 KLHL10Q6JEL2 608 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 FRMD5Q7Z6J6 570 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 FAM35AQ86V20 835 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 RALGPS2Q86X27 583 aaPredicted RBP14.66□□□□□ -0.06
PNKP-228ENST00000637325 DHTKD1Q96HY7 919 aaPredicted RBP14.66□□□□□ -0.06
PNKP-228ENST00000637325 NIF3L1Q9GZT8 377 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 LMAN1LQ9HAT1 526 aa14.66□□□□□ -0.06
PNKP-228ENST00000637325 APOBEC3GQ9HC16 384 aaKnown RBP14.66□□□□□ -0.06
PNKP-228ENST00000637325 C2orf78A6NCI8 922 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 TRIM49BA6NDI0 452 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 SPECC1L-ADORA2AF8WAN1 911 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 CCDC130P13994 396 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 PFKLP17858 780 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 CD58P19256 250 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 PMS1P54277 932 aaKnown RBP14.65□□□□□ -0.06
PNKP-228ENST00000637325 TAF10Q12962 218 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 LRRC32Q14392 662 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 CRYBG2Q8N1P7 616 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 FBXL13Q8NEE6 735 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 SLC2A14Q8TDB8 520 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 FBXO32Q969P5 355 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 SLC22A12Q96S37 553 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 KCNK16Q96T55 309 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 TTLL2Q9BWV7 592 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 NT5C1AQ9BXI3 368 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 DMAP1Q9NPF5 467 aaPredicted RBP14.65□□□□□ -0.06
PNKP-228ENST00000637325 KRT82Q9NSB4 513 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 FAM49BQ9NUQ9 324 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 GCNT4Q9P109 453 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 HMGXB4Q9UGU5 601 aa14.65□□□□□ -0.06
PNKP-228ENST00000637325 ARMCX3Q9UH62 379 aaPredicted RBP14.65□□□□□ -0.06
PNKP-228ENST00000637325 ZNF840PA6NDX5 716 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 SHISA7A6NL88 538 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 BIN1O00499 593 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 GFRA3O60609 400 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 SP9P0CG40 484 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 ADORA2BP29275 332 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 CTHP32929 405 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 IFNAR2P48551 515 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 UBE2HP62256 183 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms