RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 ZNF707Q96C28 371 aaPredicted RBP16.42■□□□□ 0.22
CTSD-207ENST00000636571 NUCKS1Q9H1E3 243 aaKnown RBP16.42■□□□□ 0.22
CTSD-207ENST00000636571 ABCB6Q9NP58 842 aa16.42■□□□□ 0.22
CTSD-207ENST00000636571 AIPL1Q9NZN9 384 aa16.42■□□□□ 0.22
CTSD-207ENST00000636571 ARHGAP20Q9P2F6 1191 aa16.42■□□□□ 0.22
CTSD-207ENST00000636571 NOCTQ9UK39 431 aaKnown RBP16.42■□□□□ 0.22
CTSD-207ENST00000636571 PYCARDQ9ULZ3 195 aa16.42■□□□□ 0.22
CTSD-207ENST00000636571 M0QYV0 167 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 MMEP08473 750 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 FAM200BP0CF97 657 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 KCNA5P22460 613 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 KLHL30Q0D2K2 578 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 HGSNATQ68CP4 663 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 LCLAT1Q6UWP7 414 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 RAD9BQ6WBX8 426 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 CCDC149Q6ZUS6 474 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 MSLNLQ96KJ4 702 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 DUSP16Q9BY84 665 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 HAUS4Q9H6D7 363 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 DAAM1Q9Y4D1 1078 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 LRG1P02750 347 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 NPR3P17342 541 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 CHRNB2P17787 502 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 HNRNPH3P31942 346 aaKnown RBP16.41■□□□□ 0.22
CTSD-207ENST00000636571 MAGEA11P43364 429 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 TUFMP49411 452 aaKnown RBP16.41■□□□□ 0.22
CTSD-207ENST00000636571 USP46P62068 366 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 NTHL1P78549 312 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 PDE4CQ08493 712 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 IFRD2Q12894 506 aaPredicted RBP16.41■□□□□ 0.22
CTSD-207ENST00000636571 CNGA2Q16280 664 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 MEA1Q16626 185 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 PKDCCQ504Y2 493 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 CYP26C1Q6V0L0 522 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 HS6ST3Q8IZP7 471 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 SYN2Q92777 582 aaPredicted RBP16.41■□□□□ 0.22
CTSD-207ENST00000636571 SECISBP2LQ93073 1101 aaKnown RBP16.41■□□□□ 0.22
CTSD-207ENST00000636571 UBE2ZQ9H832 354 aaPredicted RBP16.41■□□□□ 0.22
CTSD-207ENST00000636571 SFXN1Q9H9B4 322 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 NHEJ1Q9H9Q4 299 aaPredicted RBP16.41■□□□□ 0.22
CTSD-207ENST00000636571 CYTH4Q9UIA0 394 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 MYO6Q9UM54 1294 aa16.41■□□□□ 0.22
CTSD-207ENST00000636571 HHLA1C9JL84 531 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 PIK3R2O00459 728 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 C1RP00736 705 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 SERPING1P05155 500 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 FERP16591 822 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 EIF4A3P38919 411 aaKnown RBP16.4■□□□□ 0.22
CTSD-207ENST00000636571 ALDH1A3P47895 512 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 PDE6CP51160 858 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 VSTM1Q6UX27 236 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 WDTC1Q8N5D0 677 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 ANKRD52Q8NB46 1076 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 CCDC112Q8NEF3 446 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 SCAMP5Q8TAC9 235 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 OLIG1Q8TAK6 271 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 HDAC7Q8WUI4 952 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.4■□□□□ 0.22
CTSD-207ENST00000636571 S1PR5Q9H228 398 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 CSNK1G1Q9HCP0 422 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 DMAP1Q9NPF5 467 aaPredicted RBP16.4■□□□□ 0.22
CTSD-207ENST00000636571 HSFX1Q9UBD0 423 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 KIAA1257Q9ULG3 409 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 MYO16Q9Y6X6 1858 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 ATP8B3O60423 1300 aa16.4■□□□□ 0.22
CTSD-207ENST00000636571 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.39■□□□□ 0.21
CTSD-207ENST00000636571 NRDCO43847 1150 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 GABBR2O75899 941 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 RGS7P49802 495 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 TFF2Q03403 129 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 ZNF571Q7Z3V5 609 aaPredicted RBP16.39■□□□□ 0.21
CTSD-207ENST00000636571 TMTC1Q8IUR5 882 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 DESI2Q9BSY9 194 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 PRKD2Q9BZL6 878 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 DEF6Q9H4E7 631 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 ZNF334Q9HCZ1 680 aaPredicted RBP16.39■□□□□ 0.21
CTSD-207ENST00000636571 SPTLC3Q9NUV7 552 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 DZANK1Q9NVP4 752 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 ZDHHC7Q9NXF8 308 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 DNMT3BQ9UBC3 853 aaKnown RBP16.39■□□□□ 0.21
CTSD-207ENST00000636571 HESX1Q9UBX0 185 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 TJP2Q9UDY2 1190 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 MAFFQ9ULX9 164 aa16.39■□□□□ 0.21
CTSD-207ENST00000636571 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
CTSD-207ENST00000636571 SLC38A8A6NNN8 435 aa16.38■□□□□ 0.21
CTSD-207ENST00000636571 FECHP22830 423 aa16.38■□□□□ 0.21
CTSD-207ENST00000636571 BCAT1P54687 386 aa16.38■□□□□ 0.21
CTSD-207ENST00000636571 FMO1Q01740 532 aa16.38■□□□□ 0.21
CTSD-207ENST00000636571 BST2Q10589 180 aaKnown RBP16.38■□□□□ 0.21
CTSD-207ENST00000636571 PMF1Q6P1K2 205 aa16.38■□□□□ 0.21
CTSD-207ENST00000636571 TOGARAM2Q6ZUX3 1019 aa16.38■□□□□ 0.21
CTSD-207ENST00000636571 GRASPQ7Z6J2 395 aaPredicted RBP16.38■□□□□ 0.21
CTSD-207ENST00000636571 DNAJB7Q7Z6W7 309 aaPredicted RBP16.38■□□□□ 0.21
CTSD-207ENST00000636571 PIGZQ86VD9 579 aa16.38■□□□□ 0.21
CTSD-207ENST00000636571 C17orf53Q8N3J3 647 aaPredicted RBP16.38■□□□□ 0.21
CTSD-207ENST00000636571 SMG7Q92540 1137 aaKnown RBP16.38■□□□□ 0.21
CTSD-207ENST00000636571 C8orf48Q96LL4 319 aa16.38■□□□□ 0.21
CTSD-207ENST00000636571 CCDC42Q96M95 316 aa16.38■□□□□ 0.21
CTSD-207ENST00000636571 PCDHB18PQ96TA0 734 aa16.38■□□□□ 0.21
CTSD-207ENST00000636571 DNAI2Q9GZS0 605 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms