RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 SPATA20Q8TB22 786 aa16.64■□□□□ 0.25
SNRNP48-203ENST00000634363 RIN3Q8TB24 985 aa16.64■□□□□ 0.25
SNRNP48-203ENST00000634363 CACTINQ8WUQ7 758 aaKnown RBP16.64■□□□□ 0.25
SNRNP48-203ENST00000634363 LOXL4Q96JB6 756 aa16.64■□□□□ 0.25
SNRNP48-203ENST00000634363 HHIPQ96QV1 700 aa16.64■□□□□ 0.25
SNRNP48-203ENST00000634363 P2RY13Q9BPV8 354 aa16.64■□□□□ 0.25
SNRNP48-203ENST00000634363 KCTD10Q9H3F6 313 aa16.64■□□□□ 0.25
SNRNP48-203ENST00000634363 KIF9Q9HAQ2 790 aa16.64■□□□□ 0.25
SNRNP48-203ENST00000634363 TPRP12270 2363 aaKnown RBP16.64■□□□□ 0.25
SNRNP48-203ENST00000634363 EXOC3O60645 756 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 RAP1GAPP47736 663 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 WNT7BP56706 349 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 RPL10AP62906 217 aaKnown RBP16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 SURF1Q15526 300 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 SNRNP35Q16560 246 aaKnown RBP16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 SCARA3Q6AZY7 606 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 CBWD2Q8IUF1 395 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 SCN4BQ8IWT1 228 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 CAMKK1Q8N5S9 505 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 FAM84AQ96KN4 292 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 ACBD6Q9BR61 282 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 DUS2Q9NX74 493 aaKnown RBP16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 UXTQ9UBK9 157 aaPredicted RBP16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 L1RE1Q9UN81 338 aa16.63■□□□□ 0.25
SNRNP48-203ENST00000634363 CCDC163A0A0D9SF12 145 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 EPN2O95208 641 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 NR3C1P04150 777 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 DRD1P21728 446 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 GJA4P35212 333 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 MYL7Q01449 175 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 STIM1Q13586 685 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 PDGFRLQ15198 375 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 N4BP2L1Q5TBK1 243 aaPredicted RBP16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 STPG1Q5TH74 334 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 SPATA2LQ8IUW3 424 aaPredicted RBP16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 CPA6Q8N4T0 437 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 C1orf127Q8N9H9 656 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 RDH13Q8NBN7 331 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 RPLP0P6Q8NHW5 317 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 EXOC4Q96A65 974 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 ECT2Q9H8V3 914 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 LMBRD1Q9NUN5 540 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 MAN1B1Q9UKM7 699 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 SNX9Q9Y5X1 595 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 WNT6Q9Y6F9 365 aa16.62■□□□□ 0.25
SNRNP48-203ENST00000634363 TRAV19A0A0A6YYK7 116 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 DCLK1O15075 740 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 CKMP06732 381 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 USP17L7P0C7H9 530 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 TMEM191BP0C7N4 346 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 MPLP40238 635 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 IFNAR2P48551 515 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 MTF1Q14872 753 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 CAMK4Q16566 473 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 CCDC142Q17RM4 750 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 INTS6LQ5JSJ4 861 aaKnown RBP16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 ARL14EPQ8N8R7 260 aaPredicted RBP16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 FNBP1Q96RU3 617 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 SLC22A12Q96S37 553 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 PDE11AQ9HCR9 933 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 TRAF3IP3Q9Y228 551 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 INVSQ9Y283 1065 aa16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 R3HCC1Q9Y3T6 440 aaKnown RBP16.61■□□□□ 0.25
SNRNP48-203ENST00000634363 SOBPA7XYQ1 873 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 HCRTO43612 131 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 TADA3O75528 432 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 RPL13P26373 211 aaKnown RBP16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 PPP1R2P41236 205 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 PRCPP42785 496 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 DGKEP52429 567 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 LIMK1P53667 647 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 CREB5Q02930 508 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 ZNF268Q14587 947 aaPredicted RBP16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 FBXO43Q4G163 708 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 COBLL1Q53SF7 1204 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 CEP135Q66GS9 1140 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 OSTM1Q86WC4 334 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 SLC9A9Q8IVB4 645 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 TMEM86AQ8N2M4 240 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 OSCP1Q8WVF1 389 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 CD101Q93033 1021 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 ANKRD36BP1Q96IX9 119 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 ZC3H10Q96K80 434 aaKnown RBP16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 TSG101Q99816 390 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 LINC00597Q9H2U6 94 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 CLSTN2Q9H4D0 955 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 ANGPTL2Q9UKU9 493 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 FRMD4BQ9Y2L6 1034 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 ANAPC1Q9H1A4 1944 aa16.6■□□□□ 0.25
SNRNP48-203ENST00000634363 C2orf78A6NCI8 922 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 BIN1O00499 593 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 PSMA7O14818 248 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 TM4SF5O14894 197 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 ATP2C2O75185 946 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 NOL4O94818 638 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 RHOBTB1O94844 696 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 TNNC2P02585 160 aa16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 DLATP10515 647 aaKnown RBP16.59■□□□□ 0.25
SNRNP48-203ENST00000634363 HDCP19113 662 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms