RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 RAD23BP54727 409 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 RPL10AP62906 217 aaKnown RBP11.81□□□□□ -0.52
DDX41-219ENST00000629036 KCNH2Q12809 1159 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 CUL2Q13617 745 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 CCDC40Q4G0X9 1142 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 MIIPQ5JXC2 388 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 CYP4A22Q5TCH4 519 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 TCERG1LQ5VWI1 586 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 VITQ6UXI7 678 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 TMEM105Q8N8V8 129 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 SLC4A11Q8NBS3 891 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 SMARCD2Q92925 531 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 KAT5Q92993 513 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 ELSPBP1Q96BH3 223 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 SMOQ99835 787 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 CISHQ9NSE2 258 aa11.81□□□□□ -0.52
DDX41-219ENST00000629036 MAGEC2Q9UBF1 373 aaPredicted RBP11.81□□□□□ -0.52
DDX41-219ENST00000629036 EP300Q09472 2414 aaPredicted RBP11.81□□□□□ -0.52
DDX41-219ENST00000629036 P4HA2O15460 535 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 GNA14O95837 355 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 NPR3P17342 541 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 ZNF132P52740 706 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 CYP27A1Q02318 531 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 VEPH1Q14D04 833 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 CWF19L1Q69YN2 538 aaKnown RBP11.8□□□□□ -0.52
DDX41-219ENST00000629036 C11orf57Q6ZUT1 292 aaPredicted RBP11.8□□□□□ -0.52
DDX41-219ENST00000629036 MTSS1LQ765P7 747 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 GPRIN1Q7Z2K8 1008 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 ARHGEF19Q8IW93 802 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 SCN4BQ8IWT1 228 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 ZSCAN18Q8TBC5 510 aaPredicted RBP11.8□□□□□ -0.52
DDX41-219ENST00000629036 SLC2A14Q8TDB8 520 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 TNIP3Q96KP6 325 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 KREMEN1Q96MU8 473 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 SLC22A12Q96S37 553 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 KCNK16Q96T55 309 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 ZSWIM1Q9BR11 485 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 SLC46A2Q9BY10 475 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 IMPG2Q9BZV3 1241 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 HSD3B7Q9H2F3 369 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 FAM124BQ9H5Z6 455 aaPredicted RBP11.8□□□□□ -0.52
DDX41-219ENST00000629036 KRT82Q9NSB4 513 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 FAM49BQ9NUQ9 324 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 GCNT4Q9P109 453 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 NCOR2Q9Y618 2525 aa11.8□□□□□ -0.52
DDX41-219ENST00000629036 TPRP12270 2363 aaKnown RBP11.79□□□□□ -0.52
DDX41-219ENST00000629036 TRIM66O15016 1216 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 FGF19O95750 216 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 OLFM2O95897 454 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 MBD3O95983 291 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 AFPP02771 609 aaKnown RBP11.79□□□□□ -0.52
DDX41-219ENST00000629036 CD58P19256 250 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 CDC25CP30307 473 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 VIPR2P41587 438 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 PGFP49763 221 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 GPC5P78333 572 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 FCHO2Q0JRZ9 810 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 GPR158Q5T848 1215 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 CDKAL1Q5VV42 579 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 CLEC20AQ6ZU45 233 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 RMDN1Q96DB5 314 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 SMARCD1Q96GM5 515 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 HNRNPABQ99729 332 aaKnown RBP11.79□□□□□ -0.52
DDX41-219ENST00000629036 NT5C1AQ9BXI3 368 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 ATXN3LQ9H3M9 355 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 TASP1Q9H6P5 420 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 SIX2Q9NPC8 291 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 CNTN6Q9UQ52 1028 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 CCL26Q9Y258 94 aa11.79□□□□□ -0.52
DDX41-219ENST00000629036 RNF225M0QZC1 329 aaPredicted RBP11.78□□□□□ -0.52
DDX41-219ENST00000629036 GRIK1P39086 918 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 NUBP1P53384 320 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 ZXDBP98169 803 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 APBA1Q02410 837 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 NCAPHQ15003 741 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 CT47A1Q5JQC4 288 aaPredicted RBP11.78□□□□□ -0.52
DDX41-219ENST00000629036 CCDC183Q5T5S1 534 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 PPP1R26Q5T8A7 1209 aaPredicted RBP11.78□□□□□ -0.52
DDX41-219ENST00000629036 ARHGAP17Q68EM7 881 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 TXNDC8Q6A555 127 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 PHLDB3Q6NSJ2 640 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 DENND5BQ6ZUT9 1274 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 DGLUCYQ7Z3D6 616 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 MON1AQ86VX9 555 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 ARID3BQ8IVW6 561 aaPredicted RBP11.78□□□□□ -0.52
DDX41-219ENST00000629036 ZNF687Q8N1G0 1237 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 SCAMP5Q8TAC9 235 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 FAM200AQ8TCP9 573 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 FUCA2Q9BTY2 467 aa11.78□□□□□ -0.52
DDX41-219ENST00000629036 DDX23Q9BUQ8 820 aaKnown RBP11.78□□□□□ -0.52
DDX41-219ENST00000629036 INTS2Q9H0H0 1204 aaKnown RBP11.78□□□□□ -0.52
DDX41-219ENST00000629036 SMG9Q9H0W8 520 aaKnown RBP11.78□□□□□ -0.52
DDX41-219ENST00000629036 DMAP1Q9NPF5 467 aaPredicted RBP11.78□□□□□ -0.52
DDX41-219ENST00000629036 SAMSN1Q9NSI8 373 aaKnown RBP11.78□□□□□ -0.52
DDX41-219ENST00000629036 AJAP1Q9UKB5 411 aaPredicted RBP11.78□□□□□ -0.52
DDX41-219ENST00000629036 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDX41-219ENST00000629036 ATG2BQ96BY7 2078 aa11.77□□□□□ -0.52
DDX41-219ENST00000629036 GTPBP10A4D1E9 387 aaKnown RBP11.77□□□□□ -0.53
DDX41-219ENST00000629036 C2orf78A6NCI8 922 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms