RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 IRF7Q92985 503 aa17.76■□□□□ 0.43
UBE3D-208ENST00000626828 TMEM176AQ96HP8 235 aa17.76■□□□□ 0.43
UBE3D-208ENST00000626828 SHDQ96IW2 340 aa17.76■□□□□ 0.43
UBE3D-208ENST00000626828 NT5C1BQ96P26 610 aa17.76■□□□□ 0.43
UBE3D-208ENST00000626828 BRD9Q9H8M2 597 aa17.76■□□□□ 0.43
UBE3D-208ENST00000626828 DMAP1Q9NPF5 467 aaPredicted RBP17.76■□□□□ 0.43
UBE3D-208ENST00000626828 TRPM5Q9NZQ8 1165 aa17.76■□□□□ 0.43
UBE3D-208ENST00000626828 STK25O00506 426 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 ZNF263O14978 683 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 PDGFBP01127 241 aaPredicted RBP17.75■□□□□ 0.43
UBE3D-208ENST00000626828 CCDC130P13994 396 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 PFKLP17858 780 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 YWHAQP27348 245 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 CLCN5P51795 746 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 ZNF394Q53GI3 561 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 IRF2BP1Q8IU81 584 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 GPIHBP1Q8IV16 184 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 FAM114A1Q8IWE2 563 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 CELF5Q8N6W0 485 aaKnown RBP17.75■□□□□ 0.43
UBE3D-208ENST00000626828 LMO3Q8TAP4 145 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 CNOT6LQ96LI5 555 aaKnown RBP17.75■□□□□ 0.43
UBE3D-208ENST00000626828 SLITRK1Q96PX8 696 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 THAP9Q9H5L6 903 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 CSNK1G1Q9HCP0 422 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 TRPV5Q9NQA5 729 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 FAM49BQ9NUQ9 324 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 TMEM30AQ9NV96 361 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 CA14Q9ULX7 337 aa17.75■□□□□ 0.43
UBE3D-208ENST00000626828 ZNF318Q5VUA4 2279 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 KRBA1A5PL33 1030 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 FAM200BP0CF97 657 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 NPR3P17342 541 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 ADORA2BP29275 332 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 AVPR2P30518 371 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 GDI1P31150 447 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 PDE6CP51160 858 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 RAD23BP54727 409 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 USP46P62068 366 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 PRKCQQ04759 706 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 GRM2Q14416 872 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 ASTLQ6HA08 431 aaPredicted RBP17.74■□□□□ 0.43
UBE3D-208ENST00000626828 PHLDB3Q6NSJ2 640 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 SASS6Q6UVJ0 657 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 SLC4A11Q8NBS3 891 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 FLCNQ8NFG4 579 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 DNASE1L2Q92874 299 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 SMOQ99835 787 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 ARID3AQ99856 593 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 ARHGEF3Q9NR81 526 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 KRT82Q9NSB4 513 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 TDP1Q9NUW8 608 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 THG1LQ9NWX6 298 aaKnown RBP17.74■□□□□ 0.43
UBE3D-208ENST00000626828 IL37Q9NZH6 218 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 KIAA1257Q9ULG3 409 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 ANAPC1Q9H1A4 1944 aa17.74■□□□□ 0.43
UBE3D-208ENST00000626828 TRAV19A0A0A6YYK7 116 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 TNFRSF10BO14763 440 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 CHADO15335 359 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 USP17L7P0C7H9 530 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 HDCP19113 662 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 RFX1P22670 979 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 MTIF2P46199 727 aaKnown RBP17.73■□□□□ 0.43
UBE3D-208ENST00000626828 MAP3K7CLP57077 242 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 STARD6P59095 220 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 FCHO2Q0JRZ9 810 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 TAF10Q12962 218 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 ZNF268Q14587 947 aaPredicted RBP17.73■□□□□ 0.43
UBE3D-208ENST00000626828 ARHGAP29Q52LW3 1261 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 PPP1R26Q5T8A7 1209 aaPredicted RBP17.73■□□□□ 0.43
UBE3D-208ENST00000626828 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 ZMIZ2Q8NF64 920 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 BPIFB1Q8TDL5 484 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 OVCA2Q8WZ82 227 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 RSPRY1Q96DX4 576 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 CYP2S1Q96SQ9 504 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 DUSP16Q9BY84 665 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 KIF9Q9HAQ2 790 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 HCN4Q9Y3Q4 1203 aa17.73■□□□□ 0.43
UBE3D-208ENST00000626828 ZNF840PA6NDX5 716 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 TADA3O75528 432 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 BEST1O76090 585 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 PRKCSHP14314 528 aaPredicted RBP17.72■□□□□ 0.43
UBE3D-208ENST00000626828 NUBP1P53384 320 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 MLF2Q15773 248 aaPredicted RBP17.72■□□□□ 0.43
UBE3D-208ENST00000626828 CCDC183Q5T5S1 534 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 ARHGAP17Q68EM7 881 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 PPM1KQ8N3J5 372 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 USP13Q92995 863 aaPredicted RBP17.72■□□□□ 0.43
UBE3D-208ENST00000626828 LRRC3BQ96PB8 259 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 NELL2Q99435 816 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 UBXN6Q9BZV1 441 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 KCNH6Q9H252 994 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 FBXO44Q9H4M3 255 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 TRPC7Q9HCX4 862 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 GCNT4Q9P109 453 aa17.72■□□□□ 0.43
UBE3D-208ENST00000626828 CHORDC1Q9UHD1 332 aaPredicted RBP17.72■□□□□ 0.43
UBE3D-208ENST00000626828 NUP210Q8TEM1 1887 aaPredicted RBP17.71■□□□□ 0.43
UBE3D-208ENST00000626828 PRAMEF12O95522 483 aa17.71■□□□□ 0.43
UBE3D-208ENST00000626828 ABL1P00519 1130 aa17.71■□□□□ 0.43
UBE3D-208ENST00000626828 GLULP15104 373 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms