RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 MAN1C1Q9NR34 630 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 SMG5Q9UPR3 1016 aaKnown RBP10.82□□□□□ -0.68
VPS11-207ENST00000620429 ERVK-11Q9UQG0 969 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 LTBP1Q14766 1721 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 KDM3AQ9Y4C1 1321 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.82□□□□□ -0.68
VPS11-207ENST00000620429 RSPH10B2B2RC85 870 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 MCF2LO15068 1137 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 STAM2O75886 525 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 ESRRBO95718 433 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 RSPH10BP0C881 870 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 NPR1P16066 1061 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 MZF1P28698 734 aaPredicted RBP10.82□□□□□ -0.68
VPS11-207ENST00000620429 PMLP29590 882 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 CASP5P51878 434 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 SUZ12Q15022 739 aaKnown RBP10.82□□□□□ -0.68
VPS11-207ENST00000620429 DNAL1Q4LDG9 190 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 C1orf146Q5VVC0 180 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 LPCAT4Q643R3 524 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 CCSAPQ6IQ19 270 aaPredicted RBP10.82□□□□□ -0.68
VPS11-207ENST00000620429 ZC3H3Q8IXZ2 948 aaKnown RBP10.82□□□□□ -0.68
VPS11-207ENST00000620429 SLC35G2Q8TBE7 412 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 MED30Q96HR3 178 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 NCKIPSDQ9NZQ3 722 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 MTO1Q9Y2Z2 717 aaKnown RBP10.82□□□□□ -0.68
VPS11-207ENST00000620429 ADAMTSL1Q8N6G6 1762 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 A0A1W2PRG0 241 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 SULT1C4O75897 302 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 FARP2O94887 1054 aaPredicted RBP10.81□□□□□ -0.68
VPS11-207ENST00000620429 MSL3P1P0C860 447 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 THRAP10827 490 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 ATP6V1B1P15313 513 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 PEX2P28328 305 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 GABPAQ06546 454 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 WASHC5Q12768 1159 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 STAT4Q14765 748 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 RASA2Q15283 850 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 CDC42EP5Q6NZY7 148 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 RHBDF2Q6PJF5 856 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 TRABD2AQ86V40 505 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 TTC30AQ86WT1 665 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 LSMEM2Q8N112 164 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 PRELID2Q8N945 189 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 ACTRT2Q8TDY3 377 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 ZNF75CPQ92670 426 aaPredicted RBP10.81□□□□□ -0.68
VPS11-207ENST00000620429 OLFM1Q99784 485 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 RIOX1Q9H6W3 641 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 MTMR4Q9NYA4 1195 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 GCNT4Q9P109 453 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 WHRNQ9P202 907 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 CRNNQ9UBG3 495 aaPredicted RBP10.81□□□□□ -0.68
VPS11-207ENST00000620429 GNPTGQ9UJJ9 305 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 ADAMTS6Q9UKP5 1117 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 RAB26Q9ULW5 256 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 SATB2Q9UPW6 733 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 TMA7Q9Y2S6 64 aaKnown RBP10.81□□□□□ -0.68
VPS11-207ENST00000620429 RABGAP1Q9Y3P9 1069 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 HEMK1Q9Y5R4 338 aaPredicted RBP10.81□□□□□ -0.68
VPS11-207ENST00000620429 LTBP3Q9NS15 1303 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 B2RBV5 119 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 G3V3G9 751 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 ALOX15BO15296 676 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 RBP3P10745 1247 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 MYBPC1Q00872 1141 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 CALCOCO2Q13137 446 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 EPHA7Q15375 998 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 LRRC36Q1X8D7 754 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 C9orf131Q5VYM1 1079 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 TTC27Q6P3X3 843 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 ANKMY2Q8IV38 441 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 GLYCTKQ8IVS8 523 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 FAM20CQ8IXL6 584 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 CPSF7Q8N684 471 aaKnown RBP10.81□□□□□ -0.68
VPS11-207ENST00000620429 RFWD2Q8NHY2 731 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 LNX1Q8TBB1 728 aaPredicted RBP10.81□□□□□ -0.68
VPS11-207ENST00000620429 RANBP9Q96S59 729 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 PARVGQ9HBI0 331 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 IFT52Q9Y366 437 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 FER1L6Q2WGJ9 1857 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 SYNGAP1Q96PV0 1343 aa10.81□□□□□ -0.68
VPS11-207ENST00000620429 ANKRD63C9JTQ0 380 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 hCG_1984214I3L0E3 225 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 TP73O15350 636 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 DNAJA2O60884 412 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 TBCAO75347 108 aaKnown RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 GGPS1O95749 300 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 EEF2P13639 858 aaKnown RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 ZNF23P17027 643 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 STAT1P42224 750 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 JAM2P57087 298 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 TCP10Q12799 353 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 CYP1B1Q16678 543 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 TTBK2Q6IQ55 1244 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 APOBEC3HQ6NTF7 200 aaKnown RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 CCDC137Q6PK04 289 aaKnown RBP10.8□□□□□ -0.68
VPS11-207ENST00000620429 MIER3Q7Z3K6 550 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 CYP2U1Q7Z449 544 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 GOLM1Q8NBJ4 401 aa10.8□□□□□ -0.68
VPS11-207ENST00000620429 RFFLQ8WZ73 363 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms