RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 RBM12Q9NTZ6 932 aaKnown RBP11.36□□□□□ -0.59
TUBE1-210ENST00000604967 FAM49BQ9NUQ9 324 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 IL37Q9NZH6 218 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 PIAS3Q9Y6X2 628 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 PATJQ8NI35 1801 aa11.36□□□□□ -0.59
TUBE1-210ENST00000604967 ZNF840PA6NDX5 716 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 GOLGA6L4A6NEF3 574 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 SCAMP3O14828 347 aaKnown RBP11.35□□□□□ -0.59
TUBE1-210ENST00000604967 ZNF263O14978 683 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 FGF19O95750 216 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 CHRNB1P11230 501 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 TDGF1P13385 188 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 NUBP1P53384 320 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 PFKPQ01813 784 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 ENPEPQ07075 957 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 TAF10Q12962 218 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 ZNF77Q15935 545 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 GAB4Q2WGN9 574 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 PKN3Q6P5Z2 889 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 DENND5BQ6ZUT9 1274 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 ASCL5Q7RTU5 278 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 FRMD5Q7Z6J6 570 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 SLC2A14Q8TDB8 520 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 EZH1Q92800 747 aaPredicted RBP11.35□□□□□ -0.59
TUBE1-210ENST00000604967 ATOH1Q92858 354 aaPredicted RBP11.35□□□□□ -0.59
TUBE1-210ENST00000604967 IRF7Q92985 503 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 CCDC47Q96A33 483 aaKnown RBP11.35□□□□□ -0.59
TUBE1-210ENST00000604967 LINC00597Q9H2U6 94 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 TRPC7Q9HCX4 862 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 GKN1Q9NS71 199 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 OBP2AQ9NY56 170 aa11.35□□□□□ -0.59
TUBE1-210ENST00000604967 NDRG2Q9UN36 371 aaKnown RBP11.35□□□□□ -0.59
TUBE1-210ENST00000604967 ZNF638Q14966 1978 aaKnown RBP11.35□□□□□ -0.59
TUBE1-210ENST00000604967 GPR179Q6PRD1 2367 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 CILPO75339 1184 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 KIF20AO95235 890 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 SMC2O95347 1197 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 OLFM2O95897 454 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 OAS1P00973 400 aaKnown RBP11.34□□□□□ -0.59
TUBE1-210ENST00000604967 CALCAP01258 141 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 CD58P19256 250 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 RPL13P26373 211 aaKnown RBP11.34□□□□□ -0.59
TUBE1-210ENST00000604967 CTHP32929 405 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 NBL1P41271 181 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 STX17P56962 302 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 USP4Q13107 963 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 MTAPQ13126 283 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 TAF12Q16514 161 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 CAMK4Q16566 473 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 ARHGAP15Q53QZ3 475 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 KRT39Q6A163 491 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 KLHL10Q6JEL2 608 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 TSSK4Q6SA08 328 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 Q6ZS52 159 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 C1orf210Q8IVY1 113 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 CELF5Q8N6W0 485 aaKnown RBP11.34□□□□□ -0.59
TUBE1-210ENST00000604967 UBR7Q8N806 425 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 LMO3Q8TAP4 145 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 BPIFB1Q8TDL5 484 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 TAF4BQ92750 862 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 KAT5Q92993 513 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 P2RY11Q96G91 374 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 ZFRQ96KR1 1074 aaKnown RBP11.34□□□□□ -0.59
TUBE1-210ENST00000604967 NIF3L1Q9GZT8 377 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 EBF3Q9H4W6 596 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 CSNK1G1Q9HCP0 422 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 KRT82Q9NSB4 513 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 TDP1Q9NUW8 608 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 POLR3BQ9NW08 1133 aaPredicted RBP11.34□□□□□ -0.59
TUBE1-210ENST00000604967 RMND1Q9NWS8 449 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 OSER1Q9NX31 292 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 CHMP5Q9NZZ3 219 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 COQ4Q9Y3A0 265 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 R3HCC1Q9Y3T6 440 aaKnown RBP11.34□□□□□ -0.59
TUBE1-210ENST00000604967 R4GN57 208 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 MIA3Q5JRA6 1907 aa11.34□□□□□ -0.59
TUBE1-210ENST00000604967 FAM92AA1XBS5 289 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 PROB1E7EW31 1015 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 SPECC1L-ADORA2AF8WAN1 911 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 CETN3O15182 167 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 SLC16A3O15427 465 aaKnown RBP11.33□□□□□ -0.6
TUBE1-210ENST00000604967 KINO60870 393 aaKnown RBP11.33□□□□□ -0.6
TUBE1-210ENST00000604967 AP1G2O75843 785 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 SP9P0CG40 484 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 KRT13P13646 458 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 DDX6P26196 483 aaKnown RBP eCLIP11.33□□□□□ -0.6
TUBE1-210ENST00000604967 ADORA2BP29275 332 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 GTF2H1P32780 548 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 MXI1P50539 228 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 RAD23BP54727 409 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 FKBP3Q00688 224 aaKnown RBP11.33□□□□□ -0.6
TUBE1-210ENST00000604967 MESP2Q0VG99 397 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 IFRD2Q12894 506 aaPredicted RBP11.33□□□□□ -0.6
TUBE1-210ENST00000604967 ZNF268Q14587 947 aaPredicted RBP11.33□□□□□ -0.6
TUBE1-210ENST00000604967 MAPRE1Q15691 268 aaKnown RBP11.33□□□□□ -0.6
TUBE1-210ENST00000604967 ZNF852Q6ZMS4 543 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 CLEC20AQ6ZU45 233 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 SLC4A11Q8NBS3 891 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 NELFBQ8WX92 580 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 MRPS31Q92665 395 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms