RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 ATF6P18850 670 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 LTBRP36941 435 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 MAGEA11P43364 429 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 ZNF132P52740 706 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 BST2Q10589 180 aaKnown RBP9.83□□□□□ -0.84
ZNF548-206ENST00000597047 TRIM14Q14142 442 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 STILQ15468 1287 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 CFAP221Q4G0U5 840 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 ATAT1Q5SQI0 421 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 CYP4A22Q5TCH4 519 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 SYCE2Q6PIF2 218 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 LCLAT1Q6UWP7 414 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 CLEC20AQ6ZU45 233 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 DNAJB7Q7Z6W7 309 aaPredicted RBP9.83□□□□□ -0.84
ZNF548-206ENST00000597047 ITIH5Q86UX2 942 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 TTC30AQ86WT1 665 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 NUP93Q8N1F7 819 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 ANKRD52Q8NB46 1076 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 ST13P5Q8NFI4 369 aaPredicted RBP9.83□□□□□ -0.84
ZNF548-206ENST00000597047 SCAMP5Q8TAC9 235 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 HDAC7Q8WUI4 952 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 CPA5Q8WXQ8 436 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 ING5Q8WYH8 240 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 MRFAP1L1Q96HT8 127 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 GCNAQ96QF7 691 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 AGPAT1Q99943 283 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 EDEM3Q9BZQ6 932 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 FAM124BQ9H5Z6 455 aaPredicted RBP9.83□□□□□ -0.84
ZNF548-206ENST00000597047 HAUS4Q9H6D7 363 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 TRPC7Q9HCX4 862 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 ABCB6Q9NP58 842 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 TMEM30AQ9NV96 361 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 CHORDC1Q9UHD1 332 aaPredicted RBP9.83□□□□□ -0.84
ZNF548-206ENST00000597047 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.83□□□□□ -0.84
ZNF548-206ENST00000597047 CNTN6Q9UQ52 1028 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 DAAM1Q9Y4D1 1078 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 CEP83Q9Y592 693 aa9.83□□□□□ -0.84
ZNF548-206ENST00000597047 A0A1W2PQJ5 194 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 RHOP08100 348 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 HNRNPA1P09651 372 aaKnown RBP eCLIP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 CSH1P0DML2 217 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 CSH2P0DML3 217 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 HOXB8P17481 243 aaPredicted RBP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 YWHAQP27348 245 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 GABRR2P28476 465 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 GBP2P32456 591 aaPredicted RBP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 BCAT1P54687 386 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 USP46P62068 366 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 CYP4F8P98187 520 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 KCNC3Q14003 757 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 CTC1Q2NKJ3 1217 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 PABPC1LQ4VXU2 614 aaKnown RBP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 FIGNQ5HY92 759 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 NAA35Q5VZE5 725 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 DENND5BQ6ZUT9 1274 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 PDZD4Q76G19 769 aaPredicted RBP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 GET4Q7L5D6 327 aaPredicted RBP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 GPRIN1Q7Z2K8 1008 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 IRF2BP2Q7Z5L9 587 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 PIGZQ86VD9 579 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 SIX6OS1Q8N1H7 587 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 C1orf131Q8NDD1 294 aaKnown RBP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 ZMIZ2Q8NF64 920 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 OR8K1Q8NGG5 319 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 NDRG1Q92597 394 aaKnown RBP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 FBXO32Q969P5 355 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 TCEAL4Q96EI5 215 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 C8orf48Q96LL4 319 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 RIPOR3Q96MK2 946 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 TTYH3Q9C0H2 523 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 ADAM7Q9H2U9 754 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 ATXN3LQ9H3M9 355 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 DEF6Q9H4E7 631 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 SLITRK6Q9H5Y7 841 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 ZNF334Q9HCZ1 680 aaPredicted RBP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 ASAH2Q9NR71 780 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 ZDHHC7Q9NXF8 308 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 DNMT3BQ9UBC3 853 aaKnown RBP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 MAFFQ9ULX9 164 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 MRPS23Q9Y3D9 190 aaKnown RBP9.82□□□□□ -0.84
ZNF548-206ENST00000597047 CDH23Q9H251 3354 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 REV3LO60673 3130 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 PTPRDP23468 1912 aa9.82□□□□□ -0.84
ZNF548-206ENST00000597047 A0A1W2PRU2 124 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 GOLGA8SH3BPF8 625 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 XPO1O14980 1071 aaKnown RBP9.81□□□□□ -0.84
ZNF548-206ENST00000597047 MFAP3LO75121 409 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 RTN3O95197 1032 aaPredicted RBP9.81□□□□□ -0.84
ZNF548-206ENST00000597047 SERPING1P05155 500 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 PTMAP06454 111 aaKnown RBP9.81□□□□□ -0.84
ZNF548-206ENST00000597047 PLEKP08567 350 aaPredicted RBP9.81□□□□□ -0.84
ZNF548-206ENST00000597047 USP17L7P0C7H9 530 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 SETSIPP0DME0 302 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 CHRNB2P17787 502 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 FSHRP23945 695 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 DEKP35659 375 aaKnown RBP9.81□□□□□ -0.84
ZNF548-206ENST00000597047 TKTL1P51854 596 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 SLC5A3P53794 718 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 CDR2Q01850 454 aa9.81□□□□□ -0.84
ZNF548-206ENST00000597047 ADIGQ0VDE8 80 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms