RNA–Protein interactions for RNA: ENST00000592338.5

CNN1-209, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-209ENST00000592338 TTC8Q8TAM2 541 aa17.16■□□□□ 0.34
CNN1-209ENST00000592338 BPIFB1Q8TDL5 484 aa17.16■□□□□ 0.34
CNN1-209ENST00000592338 USP13Q92995 863 aaPredicted RBP17.16■□□□□ 0.34
CNN1-209ENST00000592338 C8orf48Q96LL4 319 aa17.16■□□□□ 0.34
CNN1-209ENST00000592338 DUSP9Q99956 384 aaKnown RBP17.16■□□□□ 0.34
CNN1-209ENST00000592338 IMPG2Q9BZV3 1241 aa17.16■□□□□ 0.34
CNN1-209ENST00000592338 NIF3L1Q9GZT8 377 aa17.16■□□□□ 0.34
CNN1-209ENST00000592338 FAM49BQ9NUQ9 324 aa17.16■□□□□ 0.34
CNN1-209ENST00000592338 OBP2AQ9NY56 170 aa17.16■□□□□ 0.34
CNN1-209ENST00000592338 PIAS3Q9Y6X2 628 aa17.16■□□□□ 0.34
CNN1-209ENST00000592338 FAM170BA6NMN3 283 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 DDX6P26196 483 aaKnown RBP eCLIP17.15■□□□□ 0.34
CNN1-209ENST00000592338 GTF2H1P32780 548 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 INCA1Q0VD86 236 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 CAMK4Q16566 473 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 CBWD6Q4V339 395 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 CBWD3Q5JTY5 395 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 CBWD5Q5RIA9 395 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 FUKQ8N0W3 1084 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 CELF5Q8N6W0 485 aaKnown RBP17.15■□□□□ 0.34
CNN1-209ENST00000592338 NELFBQ8WX92 580 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 ATOH1Q92858 354 aaPredicted RBP17.15■□□□□ 0.34
CNN1-209ENST00000592338 DHTKD1Q96HY7 919 aaPredicted RBP17.15■□□□□ 0.34
CNN1-209ENST00000592338 TNIP3Q96KP6 325 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 CYP2S1Q96SQ9 504 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 KCNK16Q96T55 309 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 GTPBP4Q9BZE4 634 aaKnown RBP17.15■□□□□ 0.34
CNN1-209ENST00000592338 KRT82Q9NSB4 513 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 NDRG2Q9UN36 371 aaKnown RBP17.15■□□□□ 0.34
CNN1-209ENST00000592338 ATP8B3O60423 1300 aa17.15■□□□□ 0.34
CNN1-209ENST00000592338 STX17P56962 302 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 TNK2Q07912 1038 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 ANGPT1Q15389 498 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 ARHGAP29Q52LW3 1261 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 TTI2Q6NXR4 508 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 ZNF852Q6ZMS4 543 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 UNC93AQ86WB7 457 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 ARL14EPQ8N8R7 260 aaPredicted RBP17.14■□□□□ 0.33
CNN1-209ENST00000592338 C12orf29Q8N999 325 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 FBXL13Q8NEE6 735 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 TTC16Q8NEE8 873 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 SLC2A14Q8TDB8 520 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 CSGALNACT1Q8TDX6 532 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 WHAMMQ8TF30 809 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 ARID3AQ99856 593 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 TTLL2Q9BWV7 592 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 TRPV5Q9NQA5 729 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 TDP1Q9NUW8 608 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 GTSE1Q9NYZ3 720 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 ZMYM5Q9UJ78 669 aa17.14■□□□□ 0.33
CNN1-209ENST00000592338 VPS13AQ96RL7 3174 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 TRAV19A0A0A6YYK7 116 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 STX10O60499 249 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 AP1G2O75843 785 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 BEST1O76090 585 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 CKMP06732 381 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 ADORA2BP29275 332 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 TRIM68Q6AZZ1 485 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 CRYBG2Q8N1P7 616 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 CCDC150Q8NCX0 1101 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 ZMIZ2Q8NF64 920 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 FAM3CQ92520 227 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 TATDN2Q93075 761 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 SLC35C1Q96A29 364 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 SMARCD1Q96GM5 515 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 CEP295NLQ96MC4 621 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 SMOQ99835 787 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 CYP3A43Q9HB55 503 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 DMAP1Q9NPF5 467 aaPredicted RBP17.13■□□□□ 0.33
CNN1-209ENST00000592338 RAB20Q9NX57 234 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 GCNT4Q9P109 453 aa17.13■□□□□ 0.33
CNN1-209ENST00000592338 ARMCX3Q9UH62 379 aaPredicted RBP17.13■□□□□ 0.33
CNN1-209ENST00000592338 CILPO75339 1184 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 PPP1R2P41236 205 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 TAF10Q12962 218 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 USP4Q13107 963 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 FZD5Q13467 585 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 ZNF394Q53GI3 561 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 TXNDC11Q6PKC3 985 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 ALYREFQ86V81 257 aaKnown RBP17.12■□□□□ 0.33
CNN1-209ENST00000592338 NUP93Q8N1F7 819 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 ZNF687Q8N1G0 1237 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 SCAMP5Q8TAC9 235 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 CEP63Q96MT8 703 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 OSBPL6Q9BZF3 934 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 KIF9Q9HAQ2 790 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 GKN1Q9NS71 199 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 TRPM5Q9NZQ8 1165 aa17.12■□□□□ 0.33
CNN1-209ENST00000592338 SOBPA7XYQ1 873 aa17.11■□□□□ 0.33
CNN1-209ENST00000592338 TNFRSF10BO14763 440 aa17.11■□□□□ 0.33
CNN1-209ENST00000592338 ABL1P00519 1130 aa17.11■□□□□ 0.33
CNN1-209ENST00000592338 USP17L7P0C7H9 530 aa17.11■□□□□ 0.33
CNN1-209ENST00000592338 ARSAP15289 507 aa17.11■□□□□ 0.33
CNN1-209ENST00000592338 HOXD11P31277 338 aaPredicted RBP17.11■□□□□ 0.33
CNN1-209ENST00000592338 KPNA1P52294 538 aaPredicted RBP17.11■□□□□ 0.33
CNN1-209ENST00000592338 SLC5A3P53794 718 aa17.11■□□□□ 0.33
CNN1-209ENST00000592338 PAK1Q13153 545 aa17.11■□□□□ 0.33
CNN1-209ENST00000592338 ZNF268Q14587 947 aaPredicted RBP17.11■□□□□ 0.33
CNN1-209ENST00000592338 ZNF77Q15935 545 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms