RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 ARHGAP20Q9P2F6 1191 aa17.6■□□□□ 0.41
GCDH-213ENST00000590627 WNT16Q9UBV4 365 aa17.6■□□□□ 0.41
GCDH-213ENST00000590627 NOCTQ9UK39 431 aaKnown RBP17.6■□□□□ 0.41
GCDH-213ENST00000590627 FBXL21Q9UKT6 434 aa17.6■□□□□ 0.41
GCDH-213ENST00000590627 CDH9Q9ULB4 789 aa17.6■□□□□ 0.41
GCDH-213ENST00000590627 DOCK8Q8NF50 2099 aa17.6■□□□□ 0.41
GCDH-213ENST00000590627 SSU72P8A0A1W2PR75 194 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 H7C4K7 107 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 TGM5O43548 720 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 PDGFRBP09619 1106 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 VDRP11473 427 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 ANXA13P27216 316 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 MAPK8IP2Q13387 824 aaPredicted RBP17.59■□□□□ 0.41
GCDH-213ENST00000590627 RTP2Q5QGT7 225 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 LILRA6Q6PI73 481 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 NOP9Q86U38 636 aaKnown RBP17.59■□□□□ 0.41
GCDH-213ENST00000590627 ZNF677Q86XU0 584 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 TMTC1Q8IUR5 882 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 PIK3R5Q8WYR1 880 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 DDX1Q92499 740 aaKnown RBP17.59■□□□□ 0.41
GCDH-213ENST00000590627 HEXIM2Q96MH2 286 aaKnown RBP17.59■□□□□ 0.41
GCDH-213ENST00000590627 BAG1Q99933 345 aaPredicted RBP17.59■□□□□ 0.41
GCDH-213ENST00000590627 HAUS4Q9H6D7 363 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 BACE2Q9Y5Z0 518 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 FAM186AA6NE01 2351 aa17.59■□□□□ 0.41
GCDH-213ENST00000590627 TSC2P49815 1807 aa17.58■□□□□ 0.41
GCDH-213ENST00000590627 PRR23AA6NEV1 266 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 OR6C75A6NL08 312 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 HCRTO43612 131 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 SKILP12757 684 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 PTPN1P18031 435 aaKnown RBP17.58■□□□□ 0.4
GCDH-213ENST00000590627 GNA15P30679 374 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 PDE6CP51160 858 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 CDR2Q01850 454 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 ARHGAP17Q68EM7 881 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 ZNF280DQ6N043 979 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 FAM171BQ6P995 826 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 ASCL5Q7RTU5 278 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 ZNF571Q7Z3V5 609 aaPredicted RBP17.58■□□□□ 0.4
GCDH-213ENST00000590627 ACOT1Q86TX2 421 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 CEP57Q86XR8 500 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 PALB2Q86YC2 1186 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 CCDC105Q8IYK2 499 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 SIX5Q8N196 739 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 B3GALNT2Q8NCR0 500 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 OR10T2Q8NGX3 314 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 LNX1Q8TBB1 728 aaPredicted RBP17.58■□□□□ 0.4
GCDH-213ENST00000590627 ZNF606Q8WXB4 792 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 RIN2Q8WYP3 895 aaPredicted RBP17.58■□□□□ 0.4
GCDH-213ENST00000590627 TFAP2BQ92481 460 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 PKMYT1Q99640 499 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 CHP1Q99653 195 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 SYT15Q9BQS2 421 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 ZSWIM1Q9BR11 485 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 PRKD2Q9BZL6 878 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 DPEP3Q9H4B8 488 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 PIDD1Q9HB75 910 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 ACP6Q9NPH0 428 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.58■□□□□ 0.4
GCDH-213ENST00000590627 VPS13AQ96RL7 3174 aa17.58■□□□□ 0.4
GCDH-213ENST00000590627 SPATA31D3P0C874 917 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 CHRNB2P17787 502 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 ACAT1P24752 427 aaKnown RBP17.57■□□□□ 0.4
GCDH-213ENST00000590627 ORC1Q13415 861 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 STILQ15468 1287 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 CNGA2Q16280 664 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 ASTE1Q2TB18 679 aaPredicted RBP17.57■□□□□ 0.4
GCDH-213ENST00000590627 CTXN3Q4LDR2 81 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 SGO2Q562F6 1265 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 INTS6LQ5JSJ4 861 aaKnown RBP17.57■□□□□ 0.4
GCDH-213ENST00000590627 SPATA31D4Q6ZUB0 917 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 OLIG1Q8TAK6 271 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 B3GALT6Q96L58 329 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 MYADMQ96S97 322 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 AGPAT1Q99943 283 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 ZCWPW1Q9H0M4 648 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 MTRRQ9UBK8 725 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 PCDHGC3Q9UN70 934 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 VWA8A3KMH1 1905 aa17.57■□□□□ 0.4
GCDH-213ENST00000590627 O00370 1275 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 THAP12O43422 761 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 MED7O43513 233 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 PI15O43692 258 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 NARSO43776 548 aaKnown RBP17.56■□□□□ 0.4
GCDH-213ENST00000590627 ZMYND10O75800 440 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 PLEKP08567 350 aaPredicted RBP17.56■□□□□ 0.4
GCDH-213ENST00000590627 SRFP11831 508 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 LAMP2P13473 410 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 CD19P15391 556 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 BRD2P25440 801 aaKnown RBP17.56■□□□□ 0.4
GCDH-213ENST00000590627 EIF4A3P38919 411 aaKnown RBP17.56■□□□□ 0.4
GCDH-213ENST00000590627 CCZ1BP86790 482 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 CCZ1P86791 482 aaPredicted RBP17.56■□□□□ 0.4
GCDH-213ENST00000590627 TSPY1Q01534 308 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 MAPRE1Q15691 268 aaKnown RBP17.56■□□□□ 0.4
GCDH-213ENST00000590627 TDRD12Q587J7 1177 aaKnown RBP17.56■□□□□ 0.4
GCDH-213ENST00000590627 SLC8B1Q6J4K2 584 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 LCLAT1Q6UWP7 414 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 GPIHBP1Q8IV16 184 aa17.56■□□□□ 0.4
GCDH-213ENST00000590627 CCDC170Q8IYT3 715 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms