RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 COQ4Q9Y3A0 265 aa10.49□□□□□ -0.73
PTPN2-208ENST00000589216 MTF2Q9Y483 593 aaPredicted RBP10.49□□□□□ -0.73
PTPN2-208ENST00000589216 CACNA1IQ9P0X4 2223 aa10.49□□□□□ -0.73
PTPN2-208ENST00000589216 WDR87Q6ZQQ6 2873 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 TRIM66O15016 1216 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 AP1G2O75843 785 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 ANXA13P27216 316 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 PPP1R2P41236 205 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 SOX9P48436 509 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 PGFP49763 221 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 TNK2Q07912 1038 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 TCF15Q12870 199 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 LRMPQ12912 555 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 USP4Q13107 963 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 SLC44A4Q53GD3 710 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 ZNF394Q53GI3 561 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 FOXR2Q6PJQ5 311 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 DENND5BQ6ZUT9 1274 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 FRMD5Q7Z6J6 570 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 FILIP1Q7Z7B0 1213 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 UNC93AQ86WB7 457 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 MFSD6LQ8IWD5 586 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 CCDC105Q8IYK2 499 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 CRYBG2Q8N1P7 616 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 UBR7Q8N806 425 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 PJA1Q8NG27 643 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 SCAMP5Q8TAC9 235 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 TTC8Q8TAM2 541 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 DEPDC1BQ8WUY9 529 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 MRPS31Q92665 395 aaKnown RBP10.48□□□□□ -0.73
PTPN2-208ENST00000589216 DNASE1L2Q92874 299 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 KAT5Q92993 513 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 SMARCD1Q96GM5 515 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 TNIP3Q96KP6 325 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 CYP2S1Q96SQ9 504 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 DDX23Q9BUQ8 820 aaKnown RBP10.48□□□□□ -0.73
PTPN2-208ENST00000589216 TRMT61BQ9BVS5 477 aaKnown RBP10.48□□□□□ -0.73
PTPN2-208ENST00000589216 NUP62CLQ9H1M0 184 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 CYP3A43Q9HB55 503 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 DMAP1Q9NPF5 467 aaPredicted RBP10.48□□□□□ -0.73
PTPN2-208ENST00000589216 CISHQ9NSE2 258 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 GCNT4Q9P109 453 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 DLGAP2Q9P1A6 1054 aa10.48□□□□□ -0.73
PTPN2-208ENST00000589216 VPS13AQ96RL7 3174 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 BICDL2A1A5D9 508 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 HHLA1C9JL84 531 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 TNFRSF10BO14763 440 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 STX10O60499 249 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 DCNP07585 359 aaKnown RBP10.47□□□□□ -0.73
PTPN2-208ENST00000589216 TARSP26639 723 aaKnown RBP10.47□□□□□ -0.73
PTPN2-208ENST00000589216 WEE1P30291 646 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 CLCN5P51795 746 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 SLC5A3P53794 718 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 RAD23BP54727 409 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 MARSP56192 900 aaKnown RBP10.47□□□□□ -0.73
PTPN2-208ENST00000589216 STARD6P59095 220 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 ZXDBP98169 803 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 TAF10Q12962 218 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 CUL2Q13617 745 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 WDR44Q5JSH3 913 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 PHLDB3Q6NSJ2 640 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 TXNDC11Q6PKC3 985 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 CLEC20AQ6ZU45 233 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 MON1AQ86VX9 555 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 IRF2BP1Q8IU81 584 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 ARHGEF19Q8IW93 802 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 ARL14EPQ8N8R7 260 aaPredicted RBP10.47□□□□□ -0.73
PTPN2-208ENST00000589216 SLC4A11Q8NBS3 891 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 LMO3Q8TAP4 145 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 CHFRQ96EP1 664 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 CNOT6LQ96LI5 555 aaKnown RBP10.47□□□□□ -0.73
PTPN2-208ENST00000589216 PHOX2BQ99453 314 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 NT5C1AQ9BXI3 368 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 SRRTQ9BXP5 876 aaKnown RBP10.47□□□□□ -0.73
PTPN2-208ENST00000589216 GPR88Q9GZN0 384 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 FAM86C1Q9NVL1 165 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 GTSE1Q9NYZ3 720 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 UXTQ9UBK9 157 aaPredicted RBP10.47□□□□□ -0.73
PTPN2-208ENST00000589216 RWDD2AQ9UIY3 292 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 PIAS3Q9Y6X2 628 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 ATP8B3O60423 1300 aa10.47□□□□□ -0.73
PTPN2-208ENST00000589216 FANCMQ8IYD8 2048 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 ZNF840PA6NDX5 716 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 OTOL1A6NHN0 477 aaPredicted RBP10.46□□□□□ -0.73
PTPN2-208ENST00000589216 HAX1O00165 279 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 SCAMP3O14828 347 aaKnown RBP10.46□□□□□ -0.73
PTPN2-208ENST00000589216 GALR2O43603 387 aaPredicted RBP10.46□□□□□ -0.73
PTPN2-208ENST00000589216 OAS1P00973 400 aaKnown RBP10.46□□□□□ -0.73
PTPN2-208ENST00000589216 CALCAP01258 141 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 CKMP06732 381 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 ARSAP15289 507 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 RFX1P22670 979 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 AVPR1AP37288 418 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 PLA2G5P39877 138 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 MAP3K7CLP57077 242 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 PFKPQ01813 784 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 APBA1Q02410 837 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 NHLH1Q02575 133 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 UBXN2BQ14CS0 331 aa10.46□□□□□ -0.73
PTPN2-208ENST00000589216 ZNF77Q15935 545 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms