RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 ELOVL4Q9GZR5 314 aa16.19■□□□□ 0.18
ERCC1-209ENST00000589214 APOBEC3GQ9HC16 384 aaKnown RBP16.19■□□□□ 0.18
ERCC1-209ENST00000589214 TRPV5Q9NQA5 729 aa16.19■□□□□ 0.18
ERCC1-209ENST00000589214 OBP2AQ9NY56 170 aa16.19■□□□□ 0.18
ERCC1-209ENST00000589214 HMGXB4Q9UGU5 601 aa16.19■□□□□ 0.18
ERCC1-209ENST00000589214 ZMYM5Q9UJ78 669 aa16.19■□□□□ 0.18
ERCC1-209ENST00000589214 NDRG2Q9UN36 371 aaKnown RBP16.19■□□□□ 0.18
ERCC1-209ENST00000589214 SHISA7A6NL88 538 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 WEE1P30291 646 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 GTF2H1P32780 548 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 ASPAP45381 313 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 SOX9P48436 509 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 MXI1P50539 228 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 USP46P62068 366 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 NOP14P78316 857 aaKnown RBP16.18■□□□□ 0.18
ERCC1-209ENST00000589214 IFRD2Q12894 506 aaPredicted RBP16.18■□□□□ 0.18
ERCC1-209ENST00000589214 ARHGAP29Q52LW3 1261 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 DENND5BQ6ZUT9 1274 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 FAM35AQ86V20 835 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 MON1AQ86VX9 555 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 CELF5Q8N6W0 485 aaKnown RBP16.18■□□□□ 0.18
ERCC1-209ENST00000589214 TTC8Q8TAM2 541 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 TAF4BQ92750 862 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 USP13Q92995 863 aaPredicted RBP16.18■□□□□ 0.18
ERCC1-209ENST00000589214 SPATA17Q96L03 361 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 MED15Q96RN5 788 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 B3GNT5Q9BYG0 378 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 TMEM30AQ9NV96 361 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 CCL26Q9Y258 94 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 MRPS17Q9Y2R5 130 aaKnown RBP16.18■□□□□ 0.18
ERCC1-209ENST00000589214 ZNF638Q14966 1978 aaKnown RBP16.18■□□□□ 0.18
ERCC1-209ENST00000589214 ATP8B3O60423 1300 aa16.18■□□□□ 0.18
ERCC1-209ENST00000589214 MAN2B1O00754 1011 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 STX10O60499 249 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 KPNA1P52294 538 aaPredicted RBP16.17■□□□□ 0.18
ERCC1-209ENST00000589214 DPCR1Q3MIW9 517 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 FRMD5Q7Z6J6 570 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 ACOT1Q86TX2 421 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 CREBRFQ8IUR6 639 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 TTC16Q8NEE8 873 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 RIN3Q8TB24 985 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 FAM3CQ92520 227 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 SLC35C1Q96A29 364 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 TNIP3Q96KP6 325 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 C8orf48Q96LL4 319 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 MED10Q9BTT4 135 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 OSBPL6Q9BZF3 934 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 KIF9Q9HAQ2 790 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 SPATA6Q9NWH7 488 aaPredicted RBP16.17■□□□□ 0.18
ERCC1-209ENST00000589214 RWDD2AQ9UIY3 292 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 HELZP42694 1942 aaKnown RBP16.17■□□□□ 0.18
ERCC1-209ENST00000589214 ANAPC1Q9H1A4 1944 aa16.17■□□□□ 0.18
ERCC1-209ENST00000589214 TRAV19A0A0A6YYK7 116 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 C2orf78A6NCI8 922 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 CKMP06732 381 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 CCDC130P13994 396 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 NDST1P52848 882 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 TNK2Q07912 1038 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 C1orf210Q8IVY1 113 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 MLKLQ8NB16 471 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 FBXL13Q8NEE6 735 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 TATDN2Q93075 761 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 CEP295NLQ96MC4 621 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 SLC22A12Q96S37 553 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 NELL2Q99435 816 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 NIF3L1Q9GZT8 377 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 METTL14Q9HCE5 456 aaKnown RBP16.16■□□□□ 0.18
ERCC1-209ENST00000589214 KRT82Q9NSB4 513 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 TDP1Q9NUW8 608 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 THG1LQ9NWX6 298 aaKnown RBP16.16■□□□□ 0.18
ERCC1-209ENST00000589214 RAB20Q9NX57 234 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 GTSE1Q9NYZ3 720 aa16.16■□□□□ 0.18
ERCC1-209ENST00000589214 NCAM2O15394 837 aa16.15■□□□□ 0.18
ERCC1-209ENST00000589214 USP17L7P0C7H9 530 aa16.15■□□□□ 0.18
ERCC1-209ENST00000589214 CD58P19256 250 aa16.15■□□□□ 0.18
ERCC1-209ENST00000589214 MAGEA9P43362 315 aa16.15■□□□□ 0.18
ERCC1-209ENST00000589214 PLCB2Q00722 1185 aa16.15■□□□□ 0.18
ERCC1-209ENST00000589214 FOXR2Q6PJQ5 311 aa16.15■□□□□ 0.18
ERCC1-209ENST00000589214 ARL14EPQ8N8R7 260 aaPredicted RBP16.15■□□□□ 0.18
ERCC1-209ENST00000589214 CCDC150Q8NCX0 1101 aa16.15■□□□□ 0.18
ERCC1-209ENST00000589214 TTLL2Q9BWV7 592 aa16.15■□□□□ 0.18
ERCC1-209ENST00000589214 FAM49BQ9NUQ9 324 aa16.15■□□□□ 0.18
ERCC1-209ENST00000589214 EHD2Q9NZN4 543 aa16.15■□□□□ 0.18
ERCC1-209ENST00000589214 SOBPA7XYQ1 873 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 SPECC1L-ADORA2AF8WAN1 911 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 CTHP32929 405 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 NBL1P41271 181 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 FMO5P49326 533 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 LRMPQ12912 555 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 USP4Q13107 963 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 ZNF268Q14587 947 aaPredicted RBP16.14■□□□□ 0.17
ERCC1-209ENST00000589214 MTF1Q14872 753 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 TRIM68Q6AZZ1 485 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 PAQR9Q6ZVX9 377 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 FUKQ8N0W3 1084 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 CLDN23Q96B33 292 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 SMARCD1Q96GM5 515 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 MSANTD3Q96H12 275 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 TWNKQ96RR1 684 aa16.14■□□□□ 0.17
ERCC1-209ENST00000589214 CYP2S1Q96SQ9 504 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms