RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	PEX1	O43933	1283 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	VPS4B	O75351	444 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	MATN4	O95460	622 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	KIT	P10721	976 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	NPR1	P16066	1061 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	KLRC1	P26715	233 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	STT3A	P46977	705 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	PRIM2	P49643	509 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	SUMO3	P55854	103 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	RPS7	P62081	194 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	SLC13A2	Q13183	592 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	STK3	Q13188	491 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	SP5	Q6BEB4	398 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	SWSAP1	Q6NVH7	229 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	PGBD2	Q6P3X8	592 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	USP17L6P	Q6QN14	398 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	PPP1R3B	Q86XI6	285 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	KRT73	Q86Y46	540 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	FANCB	Q8NB91	859 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	TRIM63	Q969Q1	353 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	IQCD	Q96DY2	449 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	LTV1	Q96GA3	475 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	MRGPRX1	Q96LB2	322 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	RIPOR3	Q96MK2	946 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	TBCB	Q99426	244 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	SMOC2	Q9H3U7	446 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	WDR26	Q9H7D7	661 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CERS4	Q9HA82	394 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	ALG13	Q9NP73	1137 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	IL17RB	Q9NRM6	502 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	AGAP1	Q9UPQ3	857 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	TMX2	Q9Y320	296 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	DAAM1	Q9Y4D1	1078 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	MAST3	O60307	1309 aa		4.36	□□□□□ -1.71
PPP4R1-229	ENST00000584754	HECW1	Q76N89	1606 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CCDC151	A5D8V7	595 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	POM121B	A6NF01	834 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CLCA1	A8K7I4	914 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	ZNF785	A8K8V0	405 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	TOR1B	O14657	336 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	TBX3	O15119	743 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	TCEA3	O75764	348 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	FGF18	O76093	207 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	SUN1	O94901	812 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	AHSG	P02765	367 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	ANXA2	P07355	339 aa	Known RBP	4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	MYL3	P08590	195 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	KCNA2	P16389	499 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CHRM3	P20309	590 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	TNFSF4	P23510	183 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	VIPR2	P41587	438 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	PIK3CB	P42338	1070 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	TEC	P42680	631 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.35	□□□□□ -1.71	2e-7	■■■■□ 24.6
PPP4R1-229	ENST00000584754	ELL	P55199	621 aa	Predicted RBP	4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	SIM1	P81133	766 aa	Predicted RBP	4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	MRPS35	P82673	323 aa	Known RBP	4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	TNFAIP2	Q03169	654 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	ZNF543	Q08ER8	600 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CHAF1A	Q13111	956 aa	Predicted RBP	4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	GRM1	Q13255	1194 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	DHX8	Q14562	1220 aa	Known RBP	4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	INSC	Q1MX18	579 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	FAM160B1	Q5W0V3	765 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CERS3	Q8IU89	383 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	YAF2	Q8IY57	180 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CCDC33	Q8N5R6	958 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	ATP11C	Q8NB49	1132 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CCDC150	Q8NCX0	1101 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	SIMC1	Q8NDZ2	872 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	PARD3B	Q8TEW8	1205 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	LPIN2	Q92539	896 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	SMO	Q99835	787 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	ARPC5L	Q9BPX5	153 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	HERPUD2	Q9BSE4	406 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	DUSP26	Q9BV47	211 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	R3HDML	Q9H3Y0	253 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	INTS13	Q9NVM9	706 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	STAP2	Q9UGK3	403 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CORO2B	Q9UQ03	480 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	PTPRT	O14522	1441 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	IQSEC2	Q5JU85	1478 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	MAGI2	Q86UL8	1455 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	EFCAB5	A4FU69	1503 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	RAPGEF6	Q8TEU7	1601 aa		4.35	□□□□□ -1.71
PPP4R1-229	ENST00000584754	PRAMEF33	A0A0G2JMD5	474 aa		4.34	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CCDC195	A0A1B0GUA6	201 aa		4.34	□□□□□ -1.71
PPP4R1-229	ENST00000584754		E7ENX8	843 aa		4.34	□□□□□ -1.71
PPP4R1-229	ENST00000584754	APOL1	O14791	398 aa		4.34	□□□□□ -1.71
PPP4R1-229	ENST00000584754	AREL1	O15033	823 aa		4.34	□□□□□ -1.71
PPP4R1-229	ENST00000584754	ADAMTS3	O15072	1205 aa		4.34	□□□□□ -1.71
PPP4R1-229	ENST00000584754	KPNA5	O15131	536 aa		4.34	□□□□□ -1.71
PPP4R1-229	ENST00000584754	CCP110	O43303	1012 aa		4.34	□□□□□ -1.71
PPP4R1-229	ENST00000584754	PRAMEF10	O60809	474 aa		4.34	□□□□□ -1.71
PPP4R1-229	ENST00000584754	GRP	P07492	148 aa		4.34	□□□□□ -1.71
PPP4R1-229	ENST00000584754	MYL4	P12829	197 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms