RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PPM1KQ8N3J5 372 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 ARL14EPQ8N8R7 260 aaPredicted RBP6.95□□□□□ -1.3
TRAF4-213ENST00000578917 BPIFB1Q8TDL5 484 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 FBXO32Q969P5 355 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 SLC35C1Q96A29 364 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 FAM122AQ96E09 287 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 TRMT2BQ96GJ1 504 aaKnown RBP6.95□□□□□ -1.3
TRAF4-213ENST00000578917 FAXDC2Q96IV6 333 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 MYRFLQ96LU7 910 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 NT5C1BQ96P26 610 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 KCNK16Q96T55 309 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 BCO2Q9BYV7 579 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 TRPV4Q9HBA0 871 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 IL21Q9HBE4 155 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 APOBEC3GQ9HC16 384 aaKnown RBP6.95□□□□□ -1.3
TRAF4-213ENST00000578917 HEBP1Q9NRV9 189 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 GKN1Q9NS71 199 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 KRT82Q9NSB4 513 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 CISHQ9NSE2 258 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 LMBRD1Q9NUN5 540 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 HMGXB4Q9UGU5 601 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 NDRG2Q9UN36 371 aaKnown RBP6.95□□□□□ -1.3
TRAF4-213ENST00000578917 TRIP11Q15643 1979 aa6.95□□□□□ -1.3
TRAF4-213ENST00000578917 KANSL1LA0AUZ9 987 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 C2orf78A6NCI8 922 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 SOBPA7XYQ1 873 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 NRG2O14511 850 aaPredicted RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 PI15O43692 258 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 LRRN2O75325 713 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 CILPO75339 1184 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 DCNP07585 359 aaKnown RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 TPM2P07951 284 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 KRT5P13647 590 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 AOC1P19801 751 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 ACO1P21399 889 aaKnown RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 FCARP24071 287 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 TBXAS1P24557 533 aaPredicted RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 ERCC5P28715 1186 aaPredicted RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 VCPP55072 806 aaKnown RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 USP46P62068 366 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 PLCB2Q00722 1185 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 AMPD2Q01433 879 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 INCA1Q0VD86 236 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 KCNH2Q12809 1159 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 TAF10Q12962 218 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 NR1H3Q13133 447 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 CUL2Q13617 745 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 IER5LQ5T953 404 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 PHLDB3Q6NSJ2 640 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 FOXR2Q6PJQ5 311 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 ZC3H3Q8IXZ2 948 aaKnown RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 FUKQ8N0W3 1084 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 EHBP1Q8NDI1 1231 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 PDZD8Q8NEN9 1154 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 SCAMP5Q8TAC9 235 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 ATOH1Q92858 354 aaPredicted RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 DNASE1L2Q92874 299 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 USP13Q92995 863 aaPredicted RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 TMEM176AQ96HP8 235 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 ZFYVE19Q96K21 471 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 HNRNPABQ99729 332 aaKnown RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 ARID3AQ99856 593 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 FOXQ1Q9C009 403 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 IRF2BPLQ9H1B7 796 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 KCNH6Q9H252 994 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 FBXO44Q9H4M3 255 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 UBE2TQ9NPD8 197 aaPredicted RBP6.94□□□□□ -1.3
TRAF4-213ENST00000578917 OBP2AQ9NY56 170 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 HESX1Q9UBX0 185 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 KIAA1257Q9ULG3 409 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 NME7Q9Y5B8 376 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 PCDHB4Q9Y5E5 795 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 PIAS3Q9Y6X2 628 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 PIEZO1Q92508 2521 aa6.94□□□□□ -1.3
TRAF4-213ENST00000578917 ATG2AQ2TAZ0 1938 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 MYH15Q9Y2K3 1946 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 ZNF840PA6NDX5 716 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 H0Y858 1186 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 CHADO15335 359 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 P4HA2O15460 535 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 PRAMEF12O95522 483 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 MBD3O95983 291 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 MBL2P11226 248 aaPredicted RBP6.93□□□□□ -1.3
TRAF4-213ENST00000578917 PRKCSHP14314 528 aaPredicted RBP6.93□□□□□ -1.3
TRAF4-213ENST00000578917 GLULP15104 373 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 NPR3P17342 541 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 WEE1P30291 646 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 USP8P40818 1118 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 IFNAR2P48551 515 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 NUBP1P53384 320 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 SLC5A3P53794 718 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 CACNA2D1P54289 1103 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 PTPN5P54829 565 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 STARD6P59095 220 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 FCHO2Q0JRZ9 810 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 PDGFRLQ15198 375 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 ITPRIPL2Q3MIP1 535 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 DPCR1Q3MIW9 517 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 SGO2Q562F6 1265 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 HSP90AA4PQ58FG1 418 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms