RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 CBWD3Q5JTY5 395 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 CBWD5Q5RIA9 395 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 SPOPLQ6IQ16 392 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 SCARA5Q6ZMJ2 495 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 ARID3BQ8IVW6 561 aaPredicted RBP13.61□□□□□ -0.23
CCDC57-211ENST00000578187 MAML2Q8IZL2 1156 aaPredicted RBP13.61□□□□□ -0.23
CCDC57-211ENST00000578187 FBXL13Q8NEE6 735 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 SEMA4DQ92854 862 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 FUBP3Q96I24 572 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCDC57-211ENST00000578187 LPIN3Q9BQK8 851 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 PI4K2AQ9BTU6 479 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 SRRTQ9BXP5 876 aaKnown RBP13.61□□□□□ -0.23
CCDC57-211ENST00000578187 LRRC3Q9BY71 257 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 IMPG2Q9BZV3 1241 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 NIF3L1Q9GZT8 377 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 CHRDQ9H2X0 955 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 SNX25Q9H3E2 840 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 TASP1Q9H6P5 420 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 APOBEC3GQ9HC16 384 aaKnown RBP13.61□□□□□ -0.23
CCDC57-211ENST00000578187 CRTAC1Q9NQ79 661 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 DACH1Q9UI36 760 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 GTF3C4Q9UKN8 822 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 CACNA1HO95180 2353 aa13.61□□□□□ -0.23
CCDC57-211ENST00000578187 ZNF638Q14966 1978 aaKnown RBP13.61□□□□□ -0.23
CCDC57-211ENST00000578187 MYH10P35580 1976 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 PMM2O15305 246 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 ATP2C2O75185 946 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 CLSTN1O94985 981 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 FGFR1OPO95684 399 aaKnown RBP13.6□□□□□ -0.23
CCDC57-211ENST00000578187 DDX6P26196 483 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCDC57-211ENST00000578187 ERCC5P28715 1186 aaPredicted RBP13.6□□□□□ -0.23
CCDC57-211ENST00000578187 WEE1P30291 646 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 GNL1P36915 607 aaPredicted RBP13.6□□□□□ -0.23
CCDC57-211ENST00000578187 AVPR1AP37288 418 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 CDH8P55286 799 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 PSMC1P62191 440 aaKnown RBP13.6□□□□□ -0.23
CCDC57-211ENST00000578187 INCA1Q0VD86 236 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 MTAPQ13126 283 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 MAPRE1Q15691 268 aaKnown RBP13.6□□□□□ -0.23
CCDC57-211ENST00000578187 GAREM2Q75VX8 874 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 ERMP1Q7Z2K6 904 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 TRIM59Q8IWR1 403 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 KIAA2013Q8IYS2 634 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 GPR161Q8N6U8 529 aaKnown RBP13.6□□□□□ -0.23
CCDC57-211ENST00000578187 OR6B3Q8NGW1 331 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 MYCBPAPQ8TBZ2 947 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 MYLPFQ96A32 169 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 FAXDC2Q96IV6 333 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 DPEP3Q9H4B8 488 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 LMAN1LQ9HAT1 526 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 PRMT8Q9NR22 394 aaPredicted RBP13.6□□□□□ -0.23
CCDC57-211ENST00000578187 RAB20Q9NX57 234 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 UXTQ9UBK9 157 aaPredicted RBP13.6□□□□□ -0.23
CCDC57-211ENST00000578187 RAB23Q9ULC3 237 aa13.6□□□□□ -0.23
CCDC57-211ENST00000578187 COL4A2P08572 1712 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 ANAPC1Q9H1A4 1944 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 SLC38A8A6NNN8 435 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 PDGFRBP09619 1106 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 CSH1P0DML2 217 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 CSH2P0DML3 217 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 MAGEA11P43364 429 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 FMO5P49326 533 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 RPL10AP62906 217 aaKnown RBP13.59□□□□□ -0.23
CCDC57-211ENST00000578187 CT47A1Q5JQC4 288 aaPredicted RBP13.59□□□□□ -0.23
CCDC57-211ENST00000578187 STXBP5Q5T5C0 1151 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 CCDC183Q5T5S1 534 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 C4orf50Q6ZRC1 276 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 RALGPS2Q86X27 583 aaPredicted RBP13.59□□□□□ -0.23
CCDC57-211ENST00000578187 SPATA2LQ8IUW3 424 aaPredicted RBP13.59□□□□□ -0.23
CCDC57-211ENST00000578187 CELF5Q8N6W0 485 aaKnown RBP13.59□□□□□ -0.23
CCDC57-211ENST00000578187 ZBTB44Q8NCP5 570 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 B3GALNT2Q8NCR0 500 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 CCDC150Q8NCX0 1101 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 BPIFB1Q8TDL5 484 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 GIPC2Q8TF65 315 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 CYP3A43Q9HB55 503 aa13.59□□□□□ -0.23
CCDC57-211ENST00000578187 SOBPA7XYQ1 873 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 A8MXQ7 604 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 ARNTLO00327 626 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 NRG2O14511 850 aaPredicted RBP13.58□□□□□ -0.24
CCDC57-211ENST00000578187 P4HA2O15460 535 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 CCDC192P0DO97 292 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 PTPN1P18031 435 aaKnown RBP13.58□□□□□ -0.24
CCDC57-211ENST00000578187 CYP2F1P24903 491 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 CDR1P51861 262 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 CYP4F8P98187 520 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 AMPD2Q01433 879 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 MDH1BQ5I0G3 518 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 DGKKQ5KSL6 1271 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 CC2D1AQ6P1N0 951 aaPredicted RBP13.58□□□□□ -0.24
CCDC57-211ENST00000578187 MAMSTRQ6ZN01 415 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 UNC93AQ86WB7 457 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 MRPS31Q92665 395 aaKnown RBP13.58□□□□□ -0.24
CCDC57-211ENST00000578187 EXOC4Q96A65 974 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 RNF25Q96BH1 459 aaPredicted RBP13.58□□□□□ -0.24
CCDC57-211ENST00000578187 PCED1BQ96HM7 432 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 CNOT6LQ96LI5 555 aaKnown RBP13.58□□□□□ -0.24
CCDC57-211ENST00000578187 FAM124BQ9H5Z6 455 aaPredicted RBP13.58□□□□□ -0.24
CCDC57-211ENST00000578187 KIF9Q9HAQ2 790 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms