RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TMEM30AQ9NV96 361 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 TRPM5Q9NZQ8 1165 aa24.93■■□□□ 1.58
SNF8-217ENST00000576353 STK25O00506 426 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 ZNF263O14978 683 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 RTN3O95197 1032 aaPredicted RBP24.92■■□□□ 1.58
SNF8-217ENST00000576353 MBD3O95983 291 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 AFPP02771 609 aaKnown RBP24.92■■□□□ 1.58
SNF8-217ENST00000576353 AVPR2P30518 371 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 GDI1P31150 447 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 USP46P62068 366 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 SLC44A4Q53GD3 710 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 ASTLQ6HA08 431 aaPredicted RBP24.92■■□□□ 1.58
SNF8-217ENST00000576353 GPIHBP1Q8IV16 184 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 CELF5Q8N6W0 485 aaKnown RBP24.92■■□□□ 1.58
SNF8-217ENST00000576353 HEXIM2Q96MH2 286 aaKnown RBP24.92■■□□□ 1.58
SNF8-217ENST00000576353 NT5C1BQ96P26 610 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 ARID3AQ99856 593 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 TRPV5Q9NQA5 729 aa24.92■■□□□ 1.58
SNF8-217ENST00000576353 TADA3O75528 432 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 FAM200BP0CF97 657 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 NPR3P17342 541 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 PRKCQQ04759 706 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 FCHO2Q0JRZ9 810 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 LRMPQ12912 555 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 ZNF394Q53GI3 561 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 PHLDB3Q6NSJ2 640 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 CREBRFQ8IUR6 639 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 RSPRY1Q96DX4 576 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 TMEM176AQ96HP8 235 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 CNOT6LQ96LI5 555 aaKnown RBP24.91■■□□□ 1.58
SNF8-217ENST00000576353 SLITRK1Q96PX8 696 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 CSNK1G1Q9HCP0 422 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 COMMD8Q9NX08 183 aa24.91■■□□□ 1.58
SNF8-217ENST00000576353 TRAV19A0A0A6YYK7 116 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 CHADO15335 359 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 PRAMEF12O95522 483 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 PFKLP17858 780 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 YWHAQP27348 245 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 ADORA2BP29275 332 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 PDE6CP51160 858 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 MLF2Q15773 248 aaPredicted RBP24.9■■□□□ 1.58
SNF8-217ENST00000576353 EHBP1Q8NDI1 1231 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 BPIFB1Q8TDL5 484 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 SMOQ99835 787 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 KCNH6Q9H252 994 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 TBC1D17Q9HA65 648 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 KIF9Q9HAQ2 790 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 TRPC7Q9HCX4 862 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 TDP1Q9NUW8 608 aa24.9■■□□□ 1.58
SNF8-217ENST00000576353 THG1LQ9NWX6 298 aaKnown RBP24.9■■□□□ 1.58
SNF8-217ENST00000576353 USP17L7P0C7H9 530 aa24.89■■□□□ 1.58
SNF8-217ENST00000576353 RAD23BP54727 409 aa24.89■■□□□ 1.58
SNF8-217ENST00000576353 VCPP55072 806 aaKnown RBP24.89■■□□□ 1.58
SNF8-217ENST00000576353 MAP3K7CLP57077 242 aa24.89■■□□□ 1.58
SNF8-217ENST00000576353 STARD6P59095 220 aa24.89■■□□□ 1.58
SNF8-217ENST00000576353 TAF10Q12962 218 aa24.89■■□□□ 1.58
SNF8-217ENST00000576353 ZNF268Q14587 947 aaPredicted RBP24.89■■□□□ 1.58
SNF8-217ENST00000576353 ARHGAP29Q52LW3 1261 aa24.89■■□□□ 1.58
SNF8-217ENST00000576353 RBM43Q6ZSC3 357 aaKnown RBP24.89■■□□□ 1.58
SNF8-217ENST00000576353 FAM114A1Q8IWE2 563 aa24.89■■□□□ 1.58
SNF8-217ENST00000576353 PDZD8Q8NEN9 1154 aa24.89■■□□□ 1.58
SNF8-217ENST00000576353 LMO3Q8TAP4 145 aa24.89■■□□□ 1.58
SNF8-217ENST00000576353 USP13Q92995 863 aaPredicted RBP24.89■■□□□ 1.58
SNF8-217ENST00000576353 SMG9Q9H0W8 520 aaKnown RBP24.89■■□□□ 1.58
SNF8-217ENST00000576353 THAP9Q9H5L6 903 aa24.89■■□□□ 1.58
SNF8-217ENST00000576353 ARIH1Q9Y4X5 557 aaPredicted RBP24.89■■□□□ 1.58
SNF8-217ENST00000576353 NCANO14594 1321 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 ZNF840PA6NDX5 716 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 TNFRSF10BO14763 440 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 AOC1P19801 751 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 NUBP1P53384 320 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 SLC5A3P53794 718 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 IFRD2Q12894 506 aaPredicted RBP24.88■■□□□ 1.57
SNF8-217ENST00000576353 CWF19L1Q69YN2 538 aaKnown RBP24.88■■□□□ 1.57
SNF8-217ENST00000576353 SLC4A11Q8NBS3 891 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 ZMIZ2Q8NF64 920 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 OVCA2Q8WZ82 227 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 LRRC3BQ96PB8 259 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 PRRX2Q99811 253 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 IL37Q9NZH6 218 aa24.88■■□□□ 1.57
SNF8-217ENST00000576353 BEST1O76090 585 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 CKMP06732 381 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 HDCP19113 662 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 PLCB2Q00722 1185 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 PPP1R26Q5T8A7 1209 aaPredicted RBP24.87■■□□□ 1.57
SNF8-217ENST00000576353 CLEC20AQ6ZU45 233 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 IRF2BP1Q8IU81 584 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 PPM1KQ8N3J5 372 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 SCAMP5Q8TAC9 235 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 FBXO32Q969P5 355 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 CYP2S1Q96SQ9 504 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 FBXO44Q9H4M3 255 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 PNPLA8Q9NP80 782 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 GCNT4Q9P109 453 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 ZDBF2Q9HCK1 2354 aa24.87■■□□□ 1.57
SNF8-217ENST00000576353 C2orf78A6NCI8 922 aa24.86■■□□□ 1.57
SNF8-217ENST00000576353 ABL1P00519 1130 aa24.86■■□□□ 1.57
SNF8-217ENST00000576353 MTIF2P46199 727 aaKnown RBP24.86■■□□□ 1.57
SNF8-217ENST00000576353 IER5LQ5T953 404 aa24.86■■□□□ 1.57
SNF8-217ENST00000576353 ARL14EPQ8N8R7 260 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms