RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 DPY19L3Q6ZPD9 716 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 ZBTB46Q86UZ6 589 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 ZNF280BQ86YH2 543 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 CELF5Q8N6W0 485 aaKnown RBP4.16□□□□□ -1.74
CDH1-211ENST00000567320 CCDC17Q96LX7 622 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 LENG8Q96PV6 779 aaPredicted RBP4.16□□□□□ -1.74
CDH1-211ENST00000567320 MAP3K14Q99558 947 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 TMEM79Q9BSE2 394 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 EFHD1Q9BUP0 239 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 ASPSCR1Q9BZE9 553 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 CXorf36Q9H7Y0 433 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 ZSCAN32Q9NX65 697 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 STAP2Q9UGK3 403 aa4.16□□□□□ -1.74
CDH1-211ENST00000567320 CES2O00748 559 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 BCAR3O75815 825 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 RNF8O76064 485 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 FGBP02675 491 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 CYP2C9P11712 490 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 XRCC6P12956 609 aaKnown RBP eCLIP4.15□□□□□ -1.75
CDH1-211ENST00000567320 ATP5F1P24539 256 aaPredicted RBP4.15□□□□□ -1.75
CDH1-211ENST00000567320 GHRHRQ02643 423 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 MLC1Q15049 377 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 FAM187BQ17R55 369 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 KRT73Q86Y46 540 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 IZUMO1Q8IYV9 350 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 MPP5Q8N3R9 675 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 SLC15A4Q8N697 577 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 SIRT6Q8N6T7 355 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 NRACQ8N912 160 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 SOCS4Q8WXH5 440 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 FYTTD1Q96QD9 318 aaKnown RBP4.15□□□□□ -1.75
CDH1-211ENST00000567320 MMS19Q96T76 1030 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 BRIP1Q9BX63 1249 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 EBF3Q9H4W6 596 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 PI4KBQ9UBF8 816 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 SCAF8Q9UPN6 1271 aaKnown RBP4.15□□□□□ -1.75
CDH1-211ENST00000567320 STXBP5LQ9Y2K9 1186 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 CNTNAP2Q9UHC6 1331 aa4.15□□□□□ -1.75
CDH1-211ENST00000567320 FNDC1Q4ZHG4 1894 aaPredicted RBP4.14□□□□□ -1.75
CDH1-211ENST00000567320 E5RJQ4 531 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 ADAM10O14672 748 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 ERC2O15083 957 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 CSF1RP07333 972 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 CT47B1P0C2W7 299 aaPredicted RBP4.14□□□□□ -1.75
CDH1-211ENST00000567320 SLC11A2P49281 568 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 ABRAQ8N0Z2 381 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 DNAJC5GQ8N7S2 189 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 ADAMTS18Q8TE60 1221 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 NSMCE1Q8WV22 266 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 TMEM171Q8WVE6 324 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 WASF1Q92558 559 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 P2RX7Q99572 595 aaKnown RBP4.14□□□□□ -1.75
CDH1-211ENST00000567320 AMFRQ9UKV5 643 aa4.14□□□□□ -1.75
CDH1-211ENST00000567320 FCHO1O14526 889 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 TJP3O95049 919 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 ALDH2P05091 517 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 MYCLP12524 364 aaPredicted RBP4.13□□□□□ -1.75
CDH1-211ENST00000567320 VCAM1P19320 739 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 DGKEP52429 567 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 COPB1P53618 953 aaKnown RBP4.13□□□□□ -1.75
CDH1-211ENST00000567320 SUMO2P61956 95 aaKnown RBP4.13□□□□□ -1.75
CDH1-211ENST00000567320 RAPGEF1Q13905 1077 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 KLHL22Q53GT1 634 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 RNASE12Q5GAN4 147 aaKnown RBP4.13□□□□□ -1.75
CDH1-211ENST00000567320 LMBRD2Q68DH5 695 aaPredicted RBP4.13□□□□□ -1.75
CDH1-211ENST00000567320 ZNF813Q6ZN06 617 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 SAMD14Q8IZD0 417 aaPredicted RBP4.13□□□□□ -1.75
CDH1-211ENST00000567320 PIGOQ8TEQ8 1089 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 RAPGEF4Q8WZA2 1011 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 PPP2R3CQ969Q6 453 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 PRR25Q96S07 402 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 CGRRF1Q99675 332 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 C17orf80Q9BSJ5 609 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 THAP7Q9BT49 309 aaPredicted RBP4.13□□□□□ -1.75
CDH1-211ENST00000567320 AASDHPPTQ9NRN7 309 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 PIH1D1Q9NWS0 290 aaKnown RBP4.13□□□□□ -1.75
CDH1-211ENST00000567320 MTMR4Q9NYA4 1195 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 IP6K2Q9UHH9 426 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 GABRQQ9UN88 632 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 SNX14Q9Y5W7 946 aa4.13□□□□□ -1.75
CDH1-211ENST00000567320 OFD1O75665 1012 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 THP07101 528 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 TMEM191BP0C7N4 346 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 CYP19A1P11511 503 aaPredicted RBP4.12□□□□□ -1.75
CDH1-211ENST00000567320 AKAP5P24588 427 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 CCKBRP32239 447 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 ZNF91Q05481 1191 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 FGL2Q14314 439 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 RBMS2Q15434 407 aaKnown RBP4.12□□□□□ -1.75
CDH1-211ENST00000567320 CYP1B1Q16678 543 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 PLA1AQ53H76 456 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 TMEM240Q5SV17 173 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 IFIT1BQ5T764 474 aaKnown RBP4.12□□□□□ -1.75
CDH1-211ENST00000567320 TMEM65Q6PI78 240 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 IRF2BP2Q7Z5L9 587 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 ZDHHC17Q8IUH5 632 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 C16orf71Q8IYS4 520 aaPredicted RBP4.12□□□□□ -1.75
CDH1-211ENST00000567320 SPARTQ8N0X7 666 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 C16orf52Q8NHV5 167 aa4.12□□□□□ -1.75
CDH1-211ENST00000567320 OSR1Q8TAX0 266 aaPredicted RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms