RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 DCAF17Q5H9S7 520 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 DMRTA1Q5VZB9 504 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 ISM2Q6H9L7 571 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 CC2D1AQ6P1N0 951 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 SPATA18Q8TC71 538 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 BPIFB1Q8TDL5 484 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 PARD3BQ8TEW8 1205 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 E2F7Q96AV8 911 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 PCED1BQ96HM7 432 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 HINFPQ9BQA5 517 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 MKNK1Q9BUB5 465 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 SLC46A2Q9BY10 475 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 IMPG2Q9BZV3 1241 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 ZNF518BQ9C0D4 1074 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 FAM49BQ9NUQ9 324 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 GTSE1Q9NYZ3 720 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 UXTQ9UBK9 157 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 CCL26Q9Y258 94 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 NME7Q9Y5B8 376 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 ATP8B3O60423 1300 aa10.78□□□□□ -0.68
GTF3C1-206ENST00000566779 KIAA1549LQ6ZVL6 1849 aa10.77□□□□□ -0.68
GTF3C1-206ENST00000566779 TRAV19A0A0A6YYK7 116 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 FAM237AA0A1B0GTK4 181 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 C2orf78A6NCI8 922 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 MAN2B1O00754 1011 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 SCAMP3O14828 347 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 NCAM2O15394 837 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 NOL4O94818 638 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 VNN1O95497 513 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 HLA-DRAP01903 254 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 P4HA1P13674 534 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 PTPN1P18031 435 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 CD58P19256 250 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 RPL13P26373 211 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 ATICP31939 592 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 CSTF1Q05048 431 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 FAM160A1Q05DH4 1040 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 ADAM9Q13443 819 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 CFAP221Q4G0U5 840 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 ARHGAP29Q52LW3 1261 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 TCERG1LQ5VWI1 586 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 TRIM68Q6AZZ1 485 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 TSSK4Q6SA08 328 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 TMEM150AQ86TG1 271 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 ACOT1Q86TX2 421 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 SLC9A9Q8IVB4 645 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 C1orf210Q8IVY1 113 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 CMTM8Q8IZV2 173 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 FMR1NBQ8N0W7 255 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 CELF5Q8N6W0 485 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 ARL14EPQ8N8R7 260 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 B3GALNT2Q8NCR0 500 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 MYCBPAPQ8TBZ2 947 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 NKD2Q969F2 451 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 SMARCE1Q969G3 411 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 FUBP3Q96I24 572 aaKnown RBP eCLIP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 TSG101Q99816 390 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 XYLT2Q9H1B5 865 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 EBF3Q9H4W6 596 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 TRPV4Q9HBA0 871 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 RBM12Q9NTZ6 932 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 DMAC2Q9NW81 257 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 RMND1Q9NWS8 449 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 THG1LQ9NWX6 298 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 HMGXB4Q9UGU5 601 aa10.77□□□□□ -0.69
GTF3C1-206ENST00000566779 FAM186AA6NE01 2351 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 SPECC1L-ADORA2AF8WAN1 911 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 CHADO15335 359 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 KINO60870 393 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 TACC1O75410 805 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 TADA3O75528 432 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 AKAP3O75969 853 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 SMC2O95347 1197 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 F11P03951 625 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 EPB41P11171 864 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 CCDC130P13994 396 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 ADORA2BP29275 332 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 MAGEA11P43364 429 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 AP3M2P53677 418 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 CACNA2D1P54289 1103 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 NOP14P78316 857 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 PON2Q15165 354 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 KLHL10Q6JEL2 608 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 FAM171BQ6P995 826 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 DENND5BQ6ZUT9 1274 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 SV2AQ7L0J3 742 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 FAM35AQ86V20 835 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 GUF1Q8N442 669 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 USP13Q92995 863 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 LRRC3BQ96PB8 259 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 SLC22A12Q96S37 553 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 CYP2S1Q96SQ9 504 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 DDX23Q9BUQ8 820 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 B3GNT5Q9BYG0 378 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 ELOVL4Q9GZR5 314 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 SDCBP2Q9H190 292 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 KRT82Q9NSB4 513 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 TDP1Q9NUW8 608 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 SMPD4Q9NXE4 827 aa10.76□□□□□ -0.69
GTF3C1-206ENST00000566779 DLGAP2Q9P1A6 1054 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms