RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 RRP9O43818 475 aaKnown RBP9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 LRCH4O75427 683 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 HEXIM1O94992 359 aaKnown RBP9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 GLI1P08151 1106 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 ODC1P11926 461 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 DESP17661 470 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 PTPN1P18031 435 aaKnown RBP9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 GPD1P21695 349 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 PSMA2P25787 234 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 LMO2P25791 158 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 SSTR3P32745 418 aaPredicted RBP9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 CLCNKBP51801 687 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 SLC8A3P57103 927 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 TAS2R40P59535 323 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 SLC25A11Q02978 314 aaKnown RBP9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 PDE4CQ08493 712 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 ZNF211Q13398 564 aaPredicted RBP9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 ORC1Q13415 861 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 C2CD6Q53TS8 623 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 CYP4A22Q5TCH4 519 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 WSCD1Q658N2 575 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 PMF1Q6P1K2 205 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 LLGL2Q6P1M3 1020 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 GLB1LQ6UWU2 654 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 MREGQ8N565 214 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 C12orf29Q8N999 325 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 JOSD2Q8TAC2 188 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 HDAC7Q8WUI4 952 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 TEKT4Q8WW24 435 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 LINC01599Q8WXQ3 324 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 SEPT8Q92599 483 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 LPPQ93052 612 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 SUSD3Q96L08 255 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 TBCBQ99426 244 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 ACBD6Q9BR61 282 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 DDX47Q9H0S4 455 aaKnown RBP9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 RAB17Q9H0T7 212 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 PNPLA8Q9NP80 782 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 FAM114A2Q9NRY5 505 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 FEZ2Q9UHY8 353 aaPredicted RBP9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 RASAL2Q9UJF2 1139 aa9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 COL4A4P53420 1690 aaPredicted RBP9.32□□□□□ -0.92
LSM3P5-201ENST00000566307 F8VP50 259 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 PAPSS1O43252 624 aaPredicted RBP9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 RNF8O76064 485 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 ENDOD1O94919 500 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 FBXO21O94952 628 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 RARAP10276 462 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 CCL5P13501 91 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 NPR3P17342 541 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 COILP38432 576 aaPredicted RBP9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 PTGIRP43119 386 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 EMP3P54852 163 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 GPNMBQ14956 572 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 MAPRE1Q15691 268 aaKnown RBP9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 CCNG2Q16589 344 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 PTPROQ16827 1216 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 TIGD5Q53EQ6 642 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 NOMO2Q5JPE7 1267 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 EFHC1Q5JVL4 640 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 SPDYCQ5MJ68 293 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 FAM102AQ5T9C2 384 aaPredicted RBP9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 DUPD1Q68J44 220 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 FAM171BQ6P995 826 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 TMEM92Q6UXU6 159 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 DSTYKQ6XUX3 929 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 FAM183BPQ6ZVS7 135 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 PAQR9Q6ZVX9 377 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 METTL23Q86XA0 190 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 CPNE8Q86YQ8 564 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 SPNS2Q8IVW8 549 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 KLHL7Q8IXQ5 586 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 ZDHHC14Q8IZN3 488 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 FUKQ8N0W3 1084 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 CRIPAKQ8N1N5 446 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 ANKLE1Q8NAG6 615 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 C3orf58Q8NDZ4 430 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 CMASQ8NFW8 434 aaPredicted RBP9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 UBA3Q8TBC4 463 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 MYCBPAPQ8TBZ2 947 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 URGCPQ8TCY9 931 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 SH3TC2Q8TF17 1288 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 CENPIQ92674 756 aaPredicted RBP9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 KHSRPQ92945 711 aaKnown RBP eCLIP9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 SLITRK1Q96PX8 696 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 PKMYT1Q99640 499 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 SYT15Q9BQS2 421 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 C11orf84Q9BUA3 381 aaPredicted RBP9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 AP1M1Q9BXS5 423 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 OSBPL8Q9BZF1 889 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 DPEP3Q9H4B8 488 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 PRDM16Q9HAZ2 1276 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 CSNK1G1Q9HCP0 422 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 METTL5Q9NRN9 209 aaKnown RBP9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 FAM49BQ9NUQ9 324 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 RNF19AQ9NV58 838 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 TMEM51Q9NW97 253 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 DDX43Q9NXZ2 648 aaKnown RBP9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 OGFRQ9NZT2 677 aa9.31□□□□□ -0.92
LSM3P5-201ENST00000566307 TJP2Q9UDY2 1190 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms