RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 MRPS17Q9Y2R5 130 aaKnown RBP19.5■□□□□ 0.71
SYNGR3-204ENST00000564642 ANAPC1Q9H1A4 1944 aa19.5■□□□□ 0.71
SYNGR3-204ENST00000564642 ZDBF2Q9HCK1 2354 aa19.5■□□□□ 0.71
SYNGR3-204ENST00000564642 FAM170BA6NMN3 283 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 MAN2B1O00754 1011 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 LRRN2O75325 713 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 TADA3O75528 432 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 CD72P21854 359 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 CACNA2D1P54289 1103 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 CCDC40Q4G0X9 1142 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 FRMD5Q7Z6J6 570 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 FAM35AQ86V20 835 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 CCDC105Q8IYK2 499 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 DTWD2Q8NBA8 298 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 SMARCD1Q96GM5 515 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 FAXDC2Q96IV6 333 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 LRRC3BQ96PB8 259 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 DUSP9Q99956 384 aaKnown RBP19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 NT5C1AQ9BXI3 368 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 TRPM5Q9NZQ8 1165 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 HMGXB4Q9UGU5 601 aa19.49■□□□□ 0.71
SYNGR3-204ENST00000564642 TRAV19A0A0A6YYK7 116 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 H0Y858 1186 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 NCAM2O15394 837 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 USP17L7P0C7H9 530 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 CD58P19256 250 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 PPP3CCP48454 512 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 USP46P62068 366 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 INCA1Q0VD86 236 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 IFRD2Q12894 506 aaPredicted RBP19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 PAK1Q13153 545 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 CBWD6Q4V339 395 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 CBWD3Q5JTY5 395 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 CBWD5Q5RIA9 395 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 TTI2Q6NXR4 508 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 PAQR9Q6ZVX9 377 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 NUP93Q8N1F7 819 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 KCNK16Q96T55 309 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 TTLL2Q9BWV7 592 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 OSBPL6Q9BZF3 934 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 KIF9Q9HAQ2 790 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 LTB4R2Q9NPC1 389 aa19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 DMAP1Q9NPF5 467 aaPredicted RBP19.48■□□□□ 0.71
SYNGR3-204ENST00000564642 COL4A3Q01955 1670 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 AP1G2O75843 785 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 RTN3O95197 1032 aaPredicted RBP19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 CCDC130P13994 396 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 GLULP15104 373 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 HDCP19113 662 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 YWHAQP27348 245 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 PDE6CP51160 858 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 KPNA1P52294 538 aaPredicted RBP19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 STX17P56962 302 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 PLCB2Q00722 1185 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 CC2D1AQ6P1N0 951 aaPredicted RBP19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 FOXR2Q6PJQ5 311 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 FUKQ8N0W3 1084 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 TTC39CQ8N584 583 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 ARL14EPQ8N8R7 260 aaPredicted RBP19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 C12orf29Q8N999 325 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 SLC2A14Q8TDB8 520 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 FAM3CQ92520 227 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 ATOH1Q92858 354 aaPredicted RBP19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 USP13Q92995 863 aaPredicted RBP19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 SLC35C1Q96A29 364 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 ZFYVE19Q96K21 471 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 SLITRK1Q96PX8 696 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 CYP2S1Q96SQ9 504 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 KRT82Q9NSB4 513 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 FAM49BQ9NUQ9 324 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 TMEM30AQ9NV96 361 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 MTF2Q9Y483 593 aaPredicted RBP19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 PIAS3Q9Y6X2 628 aa19.47■□□□□ 0.71
SYNGR3-204ENST00000564642 C2orf78A6NCI8 922 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 ARNTLO00327 626 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 CILPO75339 1184 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 FGFR1OPO95684 399 aaKnown RBP19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 ABL1P00519 1130 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 CKMP06732 381 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 MLLT6P55198 1093 aaPredicted RBP19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 TAF10Q12962 218 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 ZNF268Q14587 947 aaPredicted RBP19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 TATDN2Q93075 761 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 CYFIP2Q96F07 1278 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 TWNKQ96RR1 684 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 GKN1Q9NS71 199 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 CCL26Q9Y258 94 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 COQ4Q9Y3A0 265 aa19.46■□□□□ 0.71
SYNGR3-204ENST00000564642 COL4A2P08572 1712 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 GNA14O95837 355 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 FAM200BP0CF97 657 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 PFKLP17858 780 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 ADORA2BP29275 332 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 MAP3K7CLP57077 242 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 CETN1Q12798 172 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 ZNF394Q53GI3 561 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 CLEC17AQ6ZS10 378 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 TTC16Q8NEE8 873 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 TTC8Q8TAM2 541 aa19.45■□□□□ 0.7
SYNGR3-204ENST00000564642 FBXO32Q969P5 355 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms