RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 ZFHX2Q9C0A1 2572 aaPredicted RBP20.22■□□□□ 0.83
TRADD-203ENST00000563348 CACNA1IQ9P0X4 2223 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 TARSP26639 723 aaKnown RBP20.21■□□□□ 0.83
TRADD-203ENST00000563348 FOXR2Q6PJQ5 311 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 FILIP1Q7Z7B0 1213 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 FAM35AQ86V20 835 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 FUKQ8N0W3 1084 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 CLDN23Q96B33 292 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 ZFYVE19Q96K21 471 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 CEP63Q96MT8 703 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 CYP2S1Q96SQ9 504 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 MED10Q9BTT4 135 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 KIF9Q9HAQ2 790 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 TRPM5Q9NZQ8 1165 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 GCNT4Q9P109 453 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 HMGXB4Q9UGU5 601 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 ARMCX3Q9UH62 379 aaPredicted RBP20.21■□□□□ 0.83
TRADD-203ENST00000563348 CCL26Q9Y258 94 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 PIAS3Q9Y6X2 628 aa20.21■□□□□ 0.83
TRADD-203ENST00000563348 TRAV19A0A0A6YYK7 116 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 BIN1O00499 593 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 NCAM2O15394 837 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 USP17L7P0C7H9 530 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 HOXD11P31277 338 aaPredicted RBP20.2■□□□□ 0.82
TRADD-203ENST00000563348 PPP3CCP48454 512 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 FZD5Q13467 585 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 ANGPT1Q15389 498 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 TCERG1LQ5VWI1 586 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 KLHL10Q6JEL2 608 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 TTI2Q6NXR4 508 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 FRMD5Q7Z6J6 570 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 NUP93Q8N1F7 819 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 ZNF687Q8N1G0 1237 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 SLC22A12Q96S37 553 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 KCNK16Q96T55 309 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 DUSP9Q99956 384 aaKnown RBP20.2■□□□□ 0.82
TRADD-203ENST00000563348 NT5C1AQ9BXI3 368 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 C8orf33Q9H7E9 229 aaPredicted RBP20.2■□□□□ 0.82
TRADD-203ENST00000563348 METTL14Q9HCE5 456 aaKnown RBP20.2■□□□□ 0.82
TRADD-203ENST00000563348 TRPC7Q9HCX4 862 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 COQ4Q9Y3A0 265 aa20.2■□□□□ 0.82
TRADD-203ENST00000563348 PTPRDP23468 1912 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 RIF1Q5UIP0 2472 aaKnown RBP20.19■□□□□ 0.82
TRADD-203ENST00000563348 ZNF840PA6NDX5 716 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 PFKLP17858 780 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 HDCP19113 662 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 TRIM21P19474 475 aaKnown RBP20.19■□□□□ 0.82
TRADD-203ENST00000563348 MAGEA9P43362 315 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 TAF10Q12962 218 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 ORC1Q13415 861 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 CBWD6Q4V339 395 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 DCAF17Q5H9S7 520 aaPredicted RBP20.19■□□□□ 0.82
TRADD-203ENST00000563348 CBWD3Q5JTY5 395 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 CBWD5Q5RIA9 395 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 ARL14EPQ8N8R7 260 aaPredicted RBP20.19■□□□□ 0.82
TRADD-203ENST00000563348 C12orf29Q8N999 325 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 SLC2A14Q8TDB8 520 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 WHAMMQ8TF30 809 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 NELFBQ8WX92 580 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 FAM3CQ92520 227 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 SLC35C1Q96A29 364 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 SMARCD1Q96GM5 515 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 MSANTD3Q96H12 275 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 TWNKQ96RR1 684 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 FAM83CQ9BQN1 747 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 DMAP1Q9NPF5 467 aaPredicted RBP20.19■□□□□ 0.82
TRADD-203ENST00000563348 GKN1Q9NS71 199 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 IL37Q9NZH6 218 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 KIAA1468Q9P260 1216 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 DENND4CQ5VZ89 1909 aa20.19■□□□□ 0.82
TRADD-203ENST00000563348 BICDL2A1A5D9 508 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 C2orf78A6NCI8 922 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 CILPO75339 1184 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 AP1G2O75843 785 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 RTN3O95197 1032 aaPredicted RBP20.18■□□□□ 0.82
TRADD-203ENST00000563348 CKMP06732 381 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 CCDC130P13994 396 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 YWHAQP27348 245 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 KPNA1P52294 538 aaPredicted RBP20.18■□□□□ 0.82
TRADD-203ENST00000563348 WDR44Q5JSH3 913 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 C1orf228Q6PIY5 440 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 C1orf210Q8IVY1 113 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 TRIML1Q8N9V2 468 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 PHOX2BQ99453 314 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 HNRNPABQ99729 332 aaKnown RBP20.18■□□□□ 0.82
TRADD-203ENST00000563348 FAM86C1Q9NVL1 165 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 GTSE1Q9NYZ3 720 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 COL4A3Q01955 1670 aa20.18■□□□□ 0.82
TRADD-203ENST00000563348 NUP210Q8TEM1 1887 aaPredicted RBP20.18■□□□□ 0.82
TRADD-203ENST00000563348 PTPRZ1P23471 2315 aaPredicted RBP20.18■□□□□ 0.82
TRADD-203ENST00000563348 TNFRSF10BO14763 440 aa20.17■□□□□ 0.82
TRADD-203ENST00000563348 CD58P19256 250 aa20.17■□□□□ 0.82
TRADD-203ENST00000563348 RPS9P46781 194 aaKnown RBP20.17■□□□□ 0.82
TRADD-203ENST00000563348 PDE6CP51160 858 aa20.17■□□□□ 0.82
TRADD-203ENST00000563348 TNK2Q07912 1038 aa20.17■□□□□ 0.82
TRADD-203ENST00000563348 CAMK4Q16566 473 aa20.17■□□□□ 0.82
TRADD-203ENST00000563348 ALYREFQ86V81 257 aaKnown RBP20.17■□□□□ 0.82
TRADD-203ENST00000563348 RALGPS2Q86X27 583 aaPredicted RBP20.17■□□□□ 0.82
TRADD-203ENST00000563348 TTC39CQ8N584 583 aa20.17■□□□□ 0.82
TRADD-203ENST00000563348 ZMIZ2Q8NF64 920 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms