RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 RPL13P26373 211 aaKnown RBP11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 HOXC13P31276 330 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 NBL1P41271 181 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 NOP14P78316 857 aaKnown RBP11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 GAS6Q14393 721 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 CBWD6Q4V339 395 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 ARHGAP29Q52LW3 1261 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 CBWD3Q5JTY5 395 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 CBWD5Q5RIA9 395 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 ASCL5Q7RTU5 278 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 FRMD5Q7Z6J6 570 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 C1orf210Q8IVY1 113 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 YAF2Q8IY57 180 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 CELF5Q8N6W0 485 aaKnown RBP11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 FAM3CQ92520 227 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 C8orf48Q96LL4 319 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 SMOQ99835 787 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 FAM83CQ9BQN1 747 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 RNF38Q9H0F5 515 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 TMEM8AQ9HCN3 771 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 GKN1Q9NS71 199 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 TDP1Q9NUW8 608 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 RMND1Q9NWS8 449 aa11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 UXTQ9UBK9 157 aaPredicted RBP11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
LPCAT4-202ENST00000562404 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 PROB1E7EW31 1015 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 SPECC1L-ADORA2AF8WAN1 911 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 BIN1O00499 593 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 TNFRSF10BO14763 440 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 TRIM66O15016 1216 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 CETN3O15182 167 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 SMC2O95347 1197 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 CHRNB1P11230 501 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 KRT13P13646 458 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 ARSAP15289 507 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 DDX6P26196 483 aaKnown RBP eCLIP11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 CTHP32929 405 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 AVPR1AP37288 418 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 PGFP49763 221 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 ENPEPQ07075 957 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 INCA1Q0VD86 236 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 IFRD2Q12894 506 aaPredicted RBP11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 TAF10Q12962 218 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 ZNF77Q15935 545 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 NAIF1Q69YI7 327 aaPredicted RBP11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 ELOA2Q8IYF1 753 aaPredicted RBP11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 CRYBG2Q8N1P7 616 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 SCAMP5Q8TAC9 235 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 CSGALNACT1Q8TDX6 532 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 TAF4BQ92750 862 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 TATDN2Q93075 761 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 CCDC34Q96HJ3 373 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 ARID3AQ99856 593 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 DUSP9Q99956 384 aaKnown RBP11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 ELOVL4Q9GZR5 314 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 EBF3Q9H4W6 596 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 RBM12Q9NTZ6 932 aaKnown RBP11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 FAM49BQ9NUQ9 324 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 R4GN57 208 aa11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 RIF1Q5UIP0 2472 aaKnown RBP11.79□□□□□ -0.52
LPCAT4-202ENST00000562404 CFAP54Q96N23 3096 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 WDR87Q6ZQQ6 2873 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 ZNF840PA6NDX5 716 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 MAN2B1O00754 1011 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 KINO60870 393 aaKnown RBP11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 SP9P0CG40 484 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 EPB41P11171 864 aaKnown RBP11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 CD58P19256 250 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 ANXA13P27216 316 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 USP4Q13107 963 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 MTAPQ13126 283 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 MORC3Q14149 939 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 ZNF268Q14587 947 aaPredicted RBP11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 KRT39Q6A163 491 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 TTI2Q6NXR4 508 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 TSSK4Q6SA08 328 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 GPRIN1Q7Z2K8 1008 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 SLC2A14Q8TDB8 520 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 MED10Q9BTT4 135 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 NIF3L1Q9GZT8 377 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 IRF2BPLQ9H1B7 796 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 LMAN1LQ9HAT1 526 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 KRT82Q9NSB4 513 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 SPATA6Q9NWH7 488 aaPredicted RBP11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 C2orf42Q9NWW7 574 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 FAM186AA6NE01 2351 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 EML5Q05BV3 1969 aa11.78□□□□□ -0.52
LPCAT4-202ENST00000562404 TRAV19A0A0A6YYK7 116 aa11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 PRR23AA6NEV1 266 aa11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 SOBPA7XYQ1 873 aa11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 HHLA1C9JL84 531 aa11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 SCAMP3O14828 347 aaKnown RBP11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 CILPO75339 1184 aa11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 AP1G2O75843 785 aa11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 OLFM2O95897 454 aa11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 OAS1P00973 400 aaKnown RBP11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 CKMP06732 381 aa11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 USP17L7P0C7H9 530 aa11.77□□□□□ -0.53
LPCAT4-202ENST00000562404 P4HA1P13674 534 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms