RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 PCMTD1Q96MG8 357 aaPredicted RBP12.82□□□□□ -0.36
IRF9-211ENST00000560852 DNAJC7Q99615 494 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 NLRC4Q9NPP4 1024 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 HESX1Q9UBX0 185 aa12.82□□□□□ -0.36
IRF9-211ENST00000560852 LUC7L2Q9Y383 392 aaKnown RBP12.82□□□□□ -0.36
IRF9-211ENST00000560852 MYO9BQ13459 2157 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 F8VP50 259 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 AP1G2O75843 785 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 BEST1O76090 585 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 CLSTN1O94985 981 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 RTN3O95197 1032 aaPredicted RBP12.81□□□□□ -0.36
IRF9-211ENST00000560852 F11P03951 625 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 ZDHHC11BP0C7U3 371 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 ANXA13P27216 316 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 GRIK1P39086 918 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 KIF11P52732 1056 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 SLC8A3P57103 927 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 CDK17Q00537 523 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 CDR2Q01850 454 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 ORC1Q13415 861 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 VEPH1Q14D04 833 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 PABPC1LQ4VXU2 614 aaKnown RBP12.81□□□□□ -0.36
IRF9-211ENST00000560852 CES5AQ6NT32 575 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 LLGL2Q6P1M3 1020 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 DENND5BQ6ZUT9 1274 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 ELMOD1Q8N336 334 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 WDTC1Q8N5D0 677 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.81□□□□□ -0.36
IRF9-211ENST00000560852 ATXN2LQ8WWM7 1075 aaKnown RBP12.81□□□□□ -0.36
IRF9-211ENST00000560852 RIPOR3Q96MK2 946 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 KCNK16Q96T55 309 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 SLC4A5Q9BY07 1137 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 IL21Q9HBE4 155 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 FAM49BQ9NUQ9 324 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 DNMT3BQ9UBC3 853 aaKnown RBP12.81□□□□□ -0.36
IRF9-211ENST00000560852 UXTQ9UBK9 157 aaPredicted RBP12.81□□□□□ -0.36
IRF9-211ENST00000560852 USTQ9Y2C2 406 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 ZFP37Q9Y6Q3 630 aaPredicted RBP12.81□□□□□ -0.36
IRF9-211ENST00000560852 CLUHO75153 1309 aa12.81□□□□□ -0.36
IRF9-211ENST00000560852 GRXCR2A6NFK2 248 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 LRRC53A6NM62 1247 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 SLC38A8A6NNN8 435 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 ZNF197O14709 1029 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 MBTPS2O43462 519 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 GFPT2O94808 682 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 CYP1A1P04798 512 aaPredicted RBP12.8□□□□□ -0.36
IRF9-211ENST00000560852 CD19P15391 556 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 CHRNB2P17787 502 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 BRD2P25440 801 aaKnown RBP12.8□□□□□ -0.36
IRF9-211ENST00000560852 PDE4CQ08493 712 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 SMAD2Q15796 467 aaKnown RBP12.8□□□□□ -0.36
IRF9-211ENST00000560852 CCDC85BQ15834 202 aaPredicted RBP12.8□□□□□ -0.36
IRF9-211ENST00000560852 DDR2Q16832 855 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 AAK1Q2M2I8 961 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 PRSS36Q5K4E3 855 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 HGSNATQ68CP4 663 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 TRIM72Q6ZMU5 477 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 BEND5Q7L4P6 421 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 CCDC186Q7Z3E2 898 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 NOP9Q86U38 636 aaKnown RBP12.8□□□□□ -0.36
IRF9-211ENST00000560852 PIGZQ86VD9 579 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 OR8K1Q8NGG5 319 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 OLIG1Q8TAK6 271 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 SMG7Q92540 1137 aaKnown RBP12.8□□□□□ -0.36
IRF9-211ENST00000560852 SEPT5Q99719 369 aaPredicted RBP12.8□□□□□ -0.36
IRF9-211ENST00000560852 FBXO44Q9H4M3 255 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 KRT82Q9NSB4 513 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 IMPACTQ9P2X3 320 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 SCML2Q9UQR0 700 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 REV3LO60673 3130 aa12.8□□□□□ -0.36
IRF9-211ENST00000560852 MTCL1Q9Y4B5 1905 aaKnown RBP12.8□□□□□ -0.36
IRF9-211ENST00000560852 THAP12O43422 761 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 MOSPD3O75425 235 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 GABBR2O75899 941 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 CSPG5O95196 566 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 RHOP08100 348 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 PNMA6AP0CW24 399 aaPredicted RBP12.79□□□□□ -0.36
IRF9-211ENST00000560852 KCNA5P22460 613 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 FECHP22830 423 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 CASP14P31944 242 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 KRT9P35527 623 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 ACADSBP45954 432 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 GABRB2P47870 512 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 PDE6CP51160 858 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 MAP3K7CLP57077 242 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 GOLGA7BQ2TAP0 167 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 SFMBT2Q5VUG0 894 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 PPP1R2P3Q6NXS1 205 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 TMC5Q6UXY8 1006 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 TMEM150AQ86TG1 271 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 C12orf76Q8N812 135 aaPredicted RBP12.79□□□□□ -0.36
IRF9-211ENST00000560852 KIAA1958Q8N8K9 716 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 PDZD8Q8NEN9 1154 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 SLC30A5Q8TAD4 765 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 MED10Q9BTT4 135 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 ACP6Q9NPH0 428 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 CNGB3Q9NQW8 809 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.79□□□□□ -0.36
IRF9-211ENST00000560852 PRKAG3Q9UGI9 489 aa12.79□□□□□ -0.36
IRF9-211ENST00000560852 FAM50BQ9Y247 325 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms