RNA–Protein interactions for RNA: ENST00000560494.1

SLTM-222, Transcript of SAFB like transcription modulator, human

TSL 3

Gene SLTM, Length 674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-222	ENST00000560494	HOOK3	Q86VS8	718 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	PSTK	Q8IV42	348 aa	Known RBP	13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	GSPT2	Q8IYD1	628 aa	Known RBP	13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	ARFGAP2	Q8N6H7	521 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	B3GALNT2	Q8NCR0	500 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	KCTD13	Q8WZ19	329 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	NKD2	Q969F2	451 aa	Predicted RBP	13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	CCDC114	Q96M63	670 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	SH3GL2	Q99962	352 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	TRIM7	Q9C029	511 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	KLK14	Q9P0G3	267 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	KANSL3	Q9P2N6	904 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	ASIC3	Q9UHC3	531 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	CDH9	Q9ULB4	789 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	PADI3	Q9ULW8	664 aa		13.5	□□□□□ -0.25
SLTM-222	ENST00000560494	TRIP11	Q15643	1979 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	hCG_1818297	A0A087WSY0	165 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.49	□□□□□ -0.25
SLTM-222	ENST00000560494		E5RJQ4	531 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494		F8VP50	259 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	PTGES	O14684	152 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	GABRD	O14764	452 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	MDM4	O15151	490 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	AOC2	O75106	756 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	PARN	O95453	639 aa	Known RBP	13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	ITGAV	P06756	1048 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	ELN	P15502	786 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	PDGFRA	P16234	1089 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	ZFX	P17010	805 aa	Predicted RBP	13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	SSTR3	P32745	418 aa	Predicted RBP	13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	CDKN2B	P42772	138 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	AIF1	P55008	147 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	ZNF252P-AS1	Q0IIN9	211 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	BFSP2	Q13515	415 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	BYSL	Q13895	437 aa	Known RBP	13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	DSC3	Q14574	896 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	TAZ	Q16635	292 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	C2CD6	Q53TS8	623 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	C4orf22	Q6V702	233 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	DSTYK	Q6XUX3	929 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	BBS12	Q6ZW61	710 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	TMC3	Q7Z5M5	1100 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	IQCK	Q8N0W5	287 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	PDCD7	Q8N8D1	485 aa	Known RBP	13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	CMAS	Q8NFW8	434 aa	Predicted RBP	13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	UBA3	Q8TBC4	463 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	URGCP	Q8TCY9	931 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	CD99L2	Q8TCZ2	262 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	KBTBD7	Q8WVZ9	684 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	ART4	Q93070	314 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	ZIC5	Q96T25	663 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	MAK16	Q9BXY0	300 aa	Known RBP	13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	PHACTR1	Q9C0D0	580 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	DPH5	Q9H2P9	285 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	RRN3	Q9NYV6	651 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	CYTH4	Q9UIA0	394 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	METRN	Q9UJH8	293 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	USP18	Q9UMW8	372 aa		13.49	□□□□□ -0.25
SLTM-222	ENST00000560494	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	ARL5C	A6NH57	179 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	RNF40	O75150	1001 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	CTSH	P09668	335 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	ECHS1	P30084	290 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	GGCX	P38435	758 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	MLH1	P40692	756 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	ZNF135	P52742	658 aa	Predicted RBP	13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	PDE4C	Q08493	712 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	TUSC3	Q13454	348 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	SCARA3	Q6AZY7	606 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	TTC27	Q6P3X3	843 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	GLB1L	Q6UWU2	654 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	OLFML1	Q6UWY5	402 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	FAM183BP	Q6ZVS7	135 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	STRADA	Q7RTN6	431 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	GSTA5	Q7RTV2	222 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	PHLDB2	Q86SQ0	1253 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	SLC43A3	Q8NBI5	491 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	KCTD6	Q8NC69	237 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	HAUS1	Q96CS2	278 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	TRIM51	Q9BSJ1	452 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	DUSP16	Q9BY84	665 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	STARD7	Q9NQZ5	370 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	ZDHHC18	Q9NUE0	388 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	VPS18	Q9P253	973 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	STAP1	Q9ULZ2	295 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	PHF24	Q9UPV7	400 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	FRMPD3	Q5JV73	1810 aa		13.48	□□□□□ -0.25
SLTM-222	ENST00000560494	SCN1A	P35498	2009 aa		13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	CFAP69	A5D8W1	941 aa		13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	GOLGA6C	A6NDK9	693 aa		13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	LIAS	O43766	372 aa		13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	TRPA1	O75762	1119 aa		13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	TRUB2	O95900	331 aa	Known RBP	13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	CYP11A1	P05108	521 aa		13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	PFKM	P08237	780 aa		13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	NUDT17	P0C025	328 aa		13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	MYZAP	P0CAP1	466 aa		13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	FAM200B	P0CF97	657 aa		13.47	□□□□□ -0.25
SLTM-222	ENST00000560494	GOLGA6D	P0CG33	693 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms