RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 USP33Q8TEY7 942 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 NCKAP5LQ9HCH0 1330 aa14.33□□□□□ -0.12
CSPG4P12-202ENST00000559989 AHCYL1O43865 530 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 TNFAIP8O95379 198 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 FAM200BP0CF97 657 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 ABATP80404 500 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 CCDC80Q76M96 950 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 GLYCTKQ8IVS8 523 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 EEF1AKMT1Q8WVE0 214 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 CHID1Q9BWS9 393 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 STK33Q9BYT3 514 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 MIEF1Q9NQG6 463 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 ARHGEF10O15013 1369 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 UHRF1BP1LA0JNW5 1464 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 APOC1P02654 83 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 IQCF2Q8IXL9 164 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 CCDC33Q8N5R6 958 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 PFDN2Q9UHV9 154 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 MCM8Q9UJA3 840 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 CPSF4O95639 269 aaKnown RBP14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 FASP25445 335 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 EPB41L4AQ9HCS5 686 aaPredicted RBP14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 LIMA1Q9UHB6 759 aaKnown RBP14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 FEM1BQ9UK73 627 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 PRODHO43272 600 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 CALB2P22676 271 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 HOXD10P28358 340 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 ULK2Q8IYT8 1036 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 CHPFQ8IZ52 775 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 CAMKK1Q8N5S9 505 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 PABPC5Q96DU9 382 aaKnown RBP14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 SNX8Q9Y5X2 465 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZNF879B4DU55 563 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 ERVV-2B6SEH9 535 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 VAV1P15498 845 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 HK2P52789 917 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZBTB49Q6ZSB9 765 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 FAM172AQ8WUF8 416 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 SPIRE2Q8WWL2 714 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 NACC2Q96BF6 587 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 PPP1R10Q96QC0 940 aaKnown RBP14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 PKP1Q13835 747 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 GNA13Q14344 377 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 FAM220AQ7Z4H9 259 aa14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 RUVBL2Q9Y230 463 aaKnown RBP14.32□□□□□ -0.12
CSPG4P12-202ENST00000559989 E2F8A0AVK6 867 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 ATP6AP1LQ52LC2 224 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 TSHZ1Q6ZSZ6 1077 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 OSCP1Q8WVF1 389 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 CRNNQ9UBG3 495 aaPredicted RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 SLCO1B7G3V0H7 640 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 NR5A2O00482 541 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 TADA2AO75478 443 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 APBA3O96018 575 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 IRF1P10914 325 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 ACADSBP45954 432 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 IL2P60568 153 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 VAC14Q08AM6 782 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 NEK5Q6P3R8 708 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 GATAD2AQ86YP4 633 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 RTKN2Q8IZC4 609 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 CINPQ9BW66 212 aaPredicted RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 UTYO14607 1347 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 GSTM5P46439 218 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 HARS2P49590 506 aaKnown RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 CCNG1P51959 295 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 NAPEPLDQ6IQ20 393 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 TFB1MQ8WVM0 346 aaKnown RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 MS4A14Q96JA4 679 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 TRPC4Q9UBN4 977 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZNF112Q9UJU3 913 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 CDC25AP30304 524 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 AP1S1P61966 158 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 ERMARDQ5T6L9 678 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 IPMKQ8NFU5 416 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 STARD13Q9Y3M8 1113 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 CFAP43Q8NDM7 1665 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 MAGEA4P43358 317 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 CBX5P45973 191 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 BST2Q10589 180 aaKnown RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 AGO2Q9UKV8 859 aaKnown RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 UGGT2Q9NYU1 1516 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 GNG14A0A1W2PPG7 69 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 ASB14A6NK59 587 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 CD3EAPO15446 510 aaKnown RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 VPS26AO75436 327 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 PTSQ03393 145 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 SEL1L3Q68CR1 1132 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 CCSAPQ6IQ19 270 aaPredicted RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 MARK2Q7KZI7 788 aaKnown RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 SLC35G2Q8TBE7 412 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 USP7Q93009 1102 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 MAGEB18Q96M61 343 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 NLNQ9BYT8 704 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 FRMD8Q9BZ67 464 aaPredicted RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 MARK1Q9P0L2 795 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 FBXO40Q9UH90 709 aa14.31□□□□□ -0.12
CSPG4P12-202ENST00000559989 FDFT1P37268 417 aa14.3□□□□□ -0.12
CSPG4P12-202ENST00000559989 TMEM63BQ5T3F8 832 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms