RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 C9orf50Q5SZB4 431 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 PAPD7Q5XG87 772 aaKnown RBP18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 OR6B2Q6IFH4 312 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 C11orf63Q6NUN7 778 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 OLFML1Q6UWY5 402 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 THEM5Q8N1Q8 247 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 MCRS1Q96EZ8 462 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 SMARCAL1Q9NZC9 954 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 MRFAP1Q9Y605 127 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 TMEM191CA6NGB0 347 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 XPO1O14980 1071 aaKnown RBP18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 ARHGEF15O94989 841 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 VNN2O95498 520 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 SETSIPP0DME0 302 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 CYP2F1P24903 491 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 NDUFV1P49821 464 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 ARPP19P56211 112 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 TSPY1Q01534 308 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 ADIGQ0VDE8 80 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 RAB6CQ53S08 254 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 FAM102AQ5T9C2 384 aaPredicted RBP18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 FAM109BQ6ICB4 259 aaPredicted RBP18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 PEX26Q7Z412 305 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 TMEM110Q86TL2 294 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 FEZF2Q8TBJ5 459 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 IPO4Q8TEX9 1081 aaKnown RBP18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 HERVK_113Q902F9 699 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 KRT35Q92764 455 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 ZNF558Q96NG5 402 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 TTPALQ9BTX7 342 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 RAB6CQ9H0N0 254 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 SNX12Q9UMY4 172 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 SCINQ9Y6U3 715 aa18.26■□□□□ 0.51
CHRNA3-206ENST00000559658 HHLA1C9JL84 531 aa18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 C2CD2LO14523 706 aa18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 TBC1D4O60343 1298 aa18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 RPL34P49207 117 aaKnown RBP18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 GSCP56915 257 aaPredicted RBP18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 IFI16Q16666 785 aaKnown RBP18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 PPP1R2P3Q6NXS1 205 aa18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 HERC6Q8IVU3 1022 aa18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 KHSRPQ92945 711 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 SMARCD1Q96GM5 515 aa18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 CAPZA3Q96KX2 299 aa18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 CRISPLD1Q9H336 500 aa18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 L2HGDHQ9H9P8 463 aa18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 ABI2Q9NYB9 513 aaPredicted RBP18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 STRIP2Q9ULQ0 834 aa18.25■□□□□ 0.51
CHRNA3-206ENST00000559658 ARHGEF37A1IGU5 675 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 SOAT2O75908 522 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 MYOGP15173 224 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 FLT3P36888 993 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 GPR15P49685 360 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 RNASE9P60153 205 aaKnown RBP18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 ADCY1Q08828 1119 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 DCAF12L1Q5VU92 463 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 SDHAF4Q5VUM1 108 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 ZNF280DQ6N043 979 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 AUTS2Q8WXX7 1259 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 RIN2Q8WYP3 895 aaPredicted RBP18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 ALG3Q92685 438 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 SELENOOQ9BVL4 669 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 SLC4A7Q9Y6M7 1214 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 MYO16Q9Y6X6 1858 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 TNRC18O15417 2968 aaPredicted RBP18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 GRXCR1A8MXD5 290 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 F8VP50 259 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 DDX3YO15523 660 aaKnown RBP18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 KRT3P12035 628 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 LAG3P18627 525 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 ZNF268Q14587 947 aaPredicted RBP18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 DCUN1D2Q6PH85 259 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 ATAD1Q8NBU5 361 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 STK32AQ8WU08 396 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 CD101Q93033 1021 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 HES6Q96HZ4 224 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 OSBPL9Q96SU4 736 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 ZBED2Q9BTP6 218 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 ADAM33Q9BZ11 813 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 MRPL47Q9HD33 250 aaKnown RBP18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 CDY1Q9Y6F8 540 aa18.24■□□□□ 0.51
CHRNA3-206ENST00000559658 SIGLEC16A6NMB1 481 aa18.23■□□□□ 0.51
CHRNA3-206ENST00000559658 ATP2A2P16615 1042 aaKnown RBP18.23■□□□□ 0.51
CHRNA3-206ENST00000559658 TAS2R40P59535 323 aa18.23■□□□□ 0.51
CHRNA3-206ENST00000559658 SH3PXD2AQ5TCZ1 1133 aa18.23■□□□□ 0.51
CHRNA3-206ENST00000559658 CSNK1G1Q9HCP0 422 aa18.23■□□□□ 0.51
CHRNA3-206ENST00000559658 CHST7Q9NS84 486 aa18.23■□□□□ 0.51
CHRNA3-206ENST00000559658 TMEM59LQ9UK28 342 aa18.23■□□□□ 0.51
CHRNA3-206ENST00000559658 USTQ9Y2C2 406 aa18.23■□□□□ 0.51
CHRNA3-206ENST00000559658 SAR1BQ9Y6B6 198 aa18.23■□□□□ 0.51
CHRNA3-206ENST00000559658 MYO1FO00160 1098 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 PDE2AO00408 941 aaPredicted RBP18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 PROSCO94903 275 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 CSPG5O95196 566 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 DNAJB2P25686 324 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 MAGEA10P43363 369 aaPredicted RBP18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 ELAVL2Q12926 359 aaKnown RBP18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 AADACL2Q6P093 401 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 RNF19BQ6ZMZ0 732 aa18.22■□□□□ 0.51
CHRNA3-206ENST00000559658 SPATA2LQ8IUW3 424 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms