RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 DMAP1Q9NPF5 467 aaPredicted RBP8.71□□□□□ -1.02
SNX1-207ENST00000559401 KRT82Q9NSB4 513 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 TDP1Q9NUW8 608 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 OBP2AQ9NY56 170 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 TRPM5Q9NZQ8 1165 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 HMGXB4Q9UGU5 601 aa8.71□□□□□ -1.02
SNX1-207ENST00000559401 ARMCX3Q9UH62 379 aaPredicted RBP8.71□□□□□ -1.02
SNX1-207ENST00000559401 PATJQ8NI35 1801 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 BICDL2A1A5D9 508 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 MAN2B1O00754 1011 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 NCAM2O15394 837 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 TADA3O75528 432 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 USP17L7P0C7H9 530 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 CCDC130P13994 396 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 CD44P16070 742 aaKnown RBP8.7□□□□□ -1.02
SNX1-207ENST00000559401 TARSP26639 723 aaKnown RBP8.7□□□□□ -1.02
SNX1-207ENST00000559401 SOX9P48436 509 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 CACNA2D1P54289 1103 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 STX17P56962 302 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 USP46P62068 366 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 ENPEPQ07075 957 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 FCHO2Q0JRZ9 810 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 ANGPT1Q15389 498 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 ZNF394Q53GI3 561 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 ALYREFQ86V81 257 aaKnown RBP8.7□□□□□ -1.02
SNX1-207ENST00000559401 UNC93AQ86WB7 457 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 ELOA2Q8IYF1 753 aaPredicted RBP8.7□□□□□ -1.02
SNX1-207ENST00000559401 ARL14EPQ8N8R7 260 aaPredicted RBP8.7□□□□□ -1.02
SNX1-207ENST00000559401 SLC2A14Q8TDB8 520 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 FAM3CQ92520 227 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 USP13Q92995 863 aaPredicted RBP8.7□□□□□ -1.02
SNX1-207ENST00000559401 SMARCD1Q96GM5 515 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 MYRFLQ96LU7 910 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 CEP295NLQ96MC4 621 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 SLITRK1Q96PX8 696 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 CYP2S1Q96SQ9 504 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 NELL2Q99435 816 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 NT5C1AQ9BXI3 368 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 CYP3A43Q9HB55 503 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 APOBEC3GQ9HC16 384 aaKnown RBP8.7□□□□□ -1.02
SNX1-207ENST00000559401 SPATA6Q9NWH7 488 aaPredicted RBP8.7□□□□□ -1.02
SNX1-207ENST00000559401 RAB20Q9NX57 234 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 GTSE1Q9NYZ3 720 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 CCL26Q9Y258 94 aa8.7□□□□□ -1.02
SNX1-207ENST00000559401 MTF2Q9Y483 593 aaPredicted RBP8.7□□□□□ -1.02
SNX1-207ENST00000559401 C2orf78A6NCI8 922 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 LAMTOR5O43504 91 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 RTN3O95197 1032 aaPredicted RBP8.69□□□□□ -1.02
SNX1-207ENST00000559401 FAM200BP0CF97 657 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 HDCP19113 662 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 YWHAQP27348 245 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 WEE1P30291 646 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 IFNAR2P48551 515 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 PDE6CP51160 858 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 TNK2Q07912 1038 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 INCA1Q0VD86 236 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 LRMPQ12912 555 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 TAF10Q12962 218 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 PAK1Q13153 545 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 MORC3Q14149 939 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 CBWD6Q4V339 395 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 CBWD3Q5JTY5 395 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 CBWD5Q5RIA9 395 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 CREBRFQ8IUR6 639 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 FUKQ8N0W3 1084 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 NUP93Q8N1F7 819 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 C12orf29Q8N999 325 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 SEMA4DQ92854 862 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 FBXO32Q969P5 355 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 CEP63Q96MT8 703 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 LRRC3BQ96PB8 259 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 TWNKQ96RR1 684 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 SLC22A12Q96S37 553 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 KCNK16Q96T55 309 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 DDX23Q9BUQ8 820 aaKnown RBP8.69□□□□□ -1.02
SNX1-207ENST00000559401 METTL14Q9HCE5 456 aaKnown RBP8.69□□□□□ -1.02
SNX1-207ENST00000559401 TRPV5Q9NQA5 729 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 GKN1Q9NS71 199 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 TMEM30AQ9NV96 361 aa8.69□□□□□ -1.02
SNX1-207ENST00000559401 SOBPA7XYQ1 873 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 PPP1R3GB7ZBB8 358 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 SPECC1L-ADORA2AF8WAN1 911 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 CILPO75339 1184 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 MBL2P11226 248 aaPredicted RBP8.68□□□□□ -1.02
SNX1-207ENST00000559401 GLULP15104 373 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 BMP6P22004 513 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 PPP3CCP48454 512 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 MRE11P49959 708 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 SLC5A3P53794 718 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 MAP3K7CLP57077 242 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 ZNF268Q14587 947 aaPredicted RBP8.68□□□□□ -1.02
SNX1-207ENST00000559401 MTF1Q14872 753 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 ITPRIPL2Q3MIP1 535 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 TRIM68Q6AZZ1 485 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 TTI2Q6NXR4 508 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 FRMD5Q7Z6J6 570 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 FILIP1Q7Z7B0 1213 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 RALGPS2Q86X27 583 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms