RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 OR56A3Q8NH54 315 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 TDRD7Q8NHU6 1098 aaKnown RBP3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 MDM1Q8TC05 714 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 IFI44Q8TCB0 444 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 SPPL3Q8TCT6 385 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 CCHCR1Q8TD31 782 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 BRIX1Q8TDN6 353 aaKnown RBP3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 OTUD7AQ8TE49 926 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 AFG1LQ8WV93 481 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 TRIM43Q96BQ3 446 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 NMD3Q96D46 503 aaKnown RBP3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 COG8Q96MW5 612 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 MED15Q96RN5 788 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 RBM15Q96T37 977 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 RNPEPQ9H4A4 650 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 SPON1Q9HCB6 807 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 PREBQ9HCU5 417 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 SARS2Q9NP81 518 aaKnown RBP3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 PLSCR4Q9NRQ2 329 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 RNF181Q9P0P0 153 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 LPAR3Q9UBY5 353 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 EIF2B4Q9UI10 523 aaKnown RBP3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 SLC13A4Q9UKG4 626 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 CNPY2Q9Y2B0 182 aa3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 MYBBP1AQ9BQG0 1328 aaKnown RBP3.58□□□□□ -1.84
HMGB1P14-201ENST00000557424 C1QTNF3-AMACRE9PGA6 284 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 F2RL2O00254 374 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 BTN3A1O00481 513 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 FCHO1O14526 889 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 FOXS1O43638 330 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ZBED4O75132 1171 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 RTN3O95197 1032 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ITGA5P08648 1049 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 HNRNPA1P09651 372 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ALOX15P16050 662 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 PRDX5P30044 214 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 SOX8P57073 446 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 FOXL1Q12952 345 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 MAPK7Q13164 816 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 DUSP8Q13202 625 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 TRPC3Q13507 836 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ERV3-1Q14264 604 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 HABP2Q14520 560 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 BMT2Q1RMZ1 405 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 SLC44A4Q53GD3 710 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 TMTC4Q5T4D3 741 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 HTR3DQ70Z44 454 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 BRINP3Q76B58 766 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 PRRT2Q7Z6L0 340 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 FAM90A1Q86YD7 464 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 FITM2Q8N6M3 262 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ZNF713Q8N859 430 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 MB21D1Q8N884 522 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 PCSK9Q8NBP7 692 aaKnown RBP3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 OR52N2Q8NGI0 321 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 SCAMP5Q8TAC9 235 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 CYP2W1Q8TAV3 490 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 Q8TCH9 128 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ST8SIA4Q92187 359 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 C8orf49Q96NF6 230 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 MOGAT1Q96PD6 335 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ASB2Q96Q27 587 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 MRI1Q9BV20 369 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 SLC46A2Q9BY10 475 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ENKD1Q9H0I2 346 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 CHST8Q9H2A9 424 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 MRPL46Q9H2W6 279 aaKnown RBP3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ELAC1Q9H777 363 aaKnown RBP3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 RGL1Q9NZL6 768 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ZDHHC8Q9ULC8 765 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 ATP11BQ9Y2G3 1177 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 HS3ST4Q9Y661 456 aa3.57□□□□□ -1.84
HMGB1P14-201ENST00000557424 PRSS29PA6NIE9 313 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 B8ZZF3 427 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 SPTLC2O15270 562 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 URI1O94763 535 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 USP1O94782 785 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 ABHD16AO95870 558 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 SBK3P0C264 359 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 FPR1P21462 350 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 STAT1P42224 750 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 POLD2P49005 469 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 CARSP49589 748 aaKnown RBP3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 TLE2Q04725 743 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 SLC13A2Q13183 592 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 CTBP1Q13363 440 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 MTM1Q13496 603 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 SLC12A1Q13621 1099 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 MFSD4BQ5TF39 518 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 AFMIDQ63HM1 303 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 RAP1GAP2Q684P5 730 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 TTLL5Q6EMB2 1281 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 ACAD10Q6JQN1 1059 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 ZNF529Q6P280 563 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 SLC22A25Q6T423 547 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 DBX2Q6ZNG2 339 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 CATSPERGQ6ZRH7 1159 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 CCDC129Q6ZRS4 1044 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 FAM47EQ6ZV65 393 aa3.56□□□□□ -1.84
HMGB1P14-201ENST00000557424 BEND5Q7L4P6 421 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms