RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 ANP32AP39687 249 aaKnown RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 PGFP49763 221 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 MXI1P50539 228 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 ZXDBP98169 803 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 FKBP3Q00688 224 aaKnown RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 LRRC63Q05C16 580 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 INCA1Q0VD86 236 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 KRT39Q6A163 491 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 TRIM68Q6AZZ1 485 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 TXNDC11Q6PKC3 985 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 YAF2Q8IY57 180 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 MAML2Q8IZL2 1156 aaPredicted RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 CRYBG2Q8N1P7 616 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 ARL14EPQ8N8R7 260 aaPredicted RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 SCAMP5Q8TAC9 235 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 SLC2A14Q8TDB8 520 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 BPIFB1Q8TDL5 484 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 NELFBQ8WX92 580 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 MRPS31Q92665 395 aaKnown RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 ATOH1Q92858 354 aaPredicted RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 SLC35C1Q96A29 364 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 E2F7Q96AV8 911 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 DHTKD1Q96HY7 919 aaPredicted RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 SHDQ96IW2 340 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 MED15Q96RN5 788 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 SMOQ99835 787 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 ARID3AQ99856 593 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 MED10Q9BTT4 135 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 TTLL2Q9BWV7 592 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 NIF3L1Q9GZT8 377 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 TRPV5Q9NQA5 729 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 FAM49BQ9NUQ9 324 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 RAB20Q9NX57 234 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 GTSE1Q9NYZ3 720 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 UXTQ9UBK9 157 aaPredicted RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 NDRG2Q9UN36 371 aaKnown RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 PIAS3Q9Y6X2 628 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 FRYLO94915 3013 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 RIF1Q5UIP0 2472 aaKnown RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 CACNA1IQ9P0X4 2223 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 GPR179Q6PRD1 2367 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 TICRRQ7Z2Z1 1910 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 ZNF840PA6NDX5 716 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 PSMA7O14818 248 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 CILPO75339 1184 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 AP1G2O75843 785 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 P4HA1P13674 534 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 ARSAP15289 507 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 ADORA2BP29275 332 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 AVPR1AP37288 418 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 NUBP1P53384 320 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 IFRD2Q12894 506 aaPredicted RBP8.61□□□□□ -1.03
VTI1B-206ENST00000556461 TAF10Q12962 218 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 ANGPT1Q15389 498 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 ZNF394Q53GI3 561 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 TCERG1LQ5VWI1 586 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 NAIF1Q69YI7 327 aaPredicted RBP8.61□□□□□ -1.03
VTI1B-206ENST00000556461 ZNF852Q6ZMS4 543 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 GPRIN1Q7Z2K8 1008 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 FILIP1Q7Z7B0 1213 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 ALYREFQ86V81 257 aaKnown RBP8.61□□□□□ -1.03
VTI1B-206ENST00000556461 UNC93AQ86WB7 457 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 NUP93Q8N1F7 819 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 CELF5Q8N6W0 485 aaKnown RBP8.61□□□□□ -1.03
VTI1B-206ENST00000556461 FBXL13Q8NEE6 735 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 CHFRQ96EP1 664 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 TNIP3Q96KP6 325 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 PRRX2Q99811 253 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 FAM83CQ9BQN1 747 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 RNF38Q9H0F5 515 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 CYP3A43Q9HB55 503 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 HPS4Q9NQG7 708 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 GKN1Q9NS71 199 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 KRT82Q9NSB4 513 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 TDP1Q9NUW8 608 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 OBP2AQ9NY56 170 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 KIAA1468Q9P260 1216 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 ARMCX3Q9UH62 379 aaPredicted RBP8.61□□□□□ -1.03
VTI1B-206ENST00000556461 COQ4Q9Y3A0 265 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 OBSL1O75147 1896 aa8.61□□□□□ -1.03
VTI1B-206ENST00000556461 GREB1Q4ZG55 1949 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 NUP210Q8TEM1 1887 aaPredicted RBP8.6□□□□□ -1.03
VTI1B-206ENST00000556461 TRAV19A0A0A6YYK7 116 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 HHLA1C9JL84 531 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 SCAMP3O14828 347 aaKnown RBP8.6□□□□□ -1.03
VTI1B-206ENST00000556461 ABL1P00519 1130 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 CKMP06732 381 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 HDCP19113 662 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 YWHAQP27348 245 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 HOXD11P31277 338 aaPredicted RBP8.6□□□□□ -1.03
VTI1B-206ENST00000556461 SLC5A3P53794 718 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 MAP3K7CLP57077 242 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 LRMPQ12912 555 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 USP4Q13107 963 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 PAK1Q13153 545 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 STIM1Q13586 685 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 GAS6Q14393 721 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 ZNF268Q14587 947 aaPredicted RBP8.6□□□□□ -1.03
VTI1B-206ENST00000556461 MTF1Q14872 753 aa8.6□□□□□ -1.03
VTI1B-206ENST00000556461 ZNF77Q15935 545 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms