RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SRPK1Q96SB4 655 aaKnown RBP15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 SNX9Q9Y5X1 595 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 HUS1O60921 280 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 POLBP06746 335 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 NUDT2P50583 147 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 MYL6P60660 151 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 C16orf87Q6PH81 154 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 CDR2LQ86X02 465 aaPredicted RBP15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 LRRC71Q8N4P6 559 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 FITM2Q8N6M3 262 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 TTC8Q8TAM2 541 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 ATG4CQ96DT6 458 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 CCDC134Q9H6E4 229 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 C10orf88Q9H8K7 445 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 USP18Q9UMW8 372 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 NOD1Q9Y239 953 aa15.63■□□□□ 0.09
ARHGEF40-207ENST00000556399 FAAP100Q0VG06 881 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 FAM49BQ9NUQ9 324 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 BAG5Q9UL15 447 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 USP20Q9Y2K6 914 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 CCDC78A2IDD5 438 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 RBP5P82980 135 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 GRAMD4Q6IC98 578 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 ATP6V1E2Q96A05 226 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 CORO1CQ9ULV4 474 aaPredicted RBP15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 RPTORQ8N122 1335 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 FOXO6A8MYZ6 492 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 F8VP50 259 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 LIASO43766 372 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 NAMPTP43490 491 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 TMEM259Q4ZIN3 620 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 SYTL5Q8TDW5 730 aaPredicted RBP15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 CNBD2Q96M20 576 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 ZNF184Q99676 751 aaPredicted RBP15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 TMEM109Q9BVC6 243 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 NT5C1AQ9BXI3 368 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 KLHL4Q9C0H6 718 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 C20orf96Q9NUD7 363 aaPredicted RBP15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 ADGRA3Q8IWK6 1321 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 SNHG28P0DPA3 235 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 CA8P35219 290 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 CAP2P40123 477 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 MAMLD1Q13495 774 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 TMEM132DQ14C87 1099 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 ATP13A4Q4VNC1 1196 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 PIGWQ7Z7B1 504 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 SEPT1Q8WYJ6 367 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 MRPL1Q9BYD6 325 aaKnown RBP15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 VPS33BQ9H267 617 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 ZNF212Q9UDV6 495 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 VAV3Q9UKW4 847 aa15.62■□□□□ 0.09
ARHGEF40-207ENST00000556399 GSTA4O15217 222 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 NLRP11P59045 1033 aaKnown RBP15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 PRAMEP78395 509 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 C15orf52Q6ZUT6 534 aaKnown RBP15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 TRABD2AQ86V40 505 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 SPIRE2Q8WWL2 714 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 RMDN2Q96LZ7 410 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 BEGAINQ9BUH8 593 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 GPATCH2LQ9NWQ4 482 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 SLC4A1P02730 911 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 GCLCP48506 637 aaPredicted RBP15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 SULT1E1P49888 294 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 RPL10AP62906 217 aaKnown RBP15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 USP10Q14694 798 aaKnown RBP15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 AURKCQ9UQB9 309 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 STXBP5LQ9Y2K9 1186 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 ZNF711Q9Y462 761 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 NKRFO15226 690 aaKnown RBP eCLIP15.61■□□□□ 0.095e-9■■■□□ 16.6
ARHGEF40-207ENST00000556399 OGTO15294 1046 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 IL18RAPO95256 599 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 PTGIRP43119 386 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 GTF2BQ00403 316 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 LAMB3Q13751 1172 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 PARP6Q2NL67 630 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 ING2Q9H160 280 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 TMEM59LQ9UK28 342 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 SEC24DO94855 1032 aaPredicted RBP15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 ATP6V1C1P21283 382 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 YWHAHQ04917 246 aaPredicted RBP15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 CYLC2Q14093 348 aaPredicted RBP15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 ECHDC2Q86YB7 292 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 CCDC33Q8N5R6 958 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 LRRC15Q8TF66 581 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 PBXIP1Q96AQ6 731 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 GRHL1Q9NZI5 618 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 SAE1Q9UBE0 346 aaPredicted RBP15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 SUN2Q9UH99 717 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 CDYLQ9Y232 598 aa15.61■□□□□ 0.09
ARHGEF40-207ENST00000556399 BCL9LQ86UU0 1499 aa15.6■□□□□ 0.09
ARHGEF40-207ENST00000556399 MEI4A8MW99 385 aa15.6■□□□□ 0.09
ARHGEF40-207ENST00000556399 SH3BP5O60239 455 aa15.6■□□□□ 0.09
ARHGEF40-207ENST00000556399 EDF1O60869 148 aaKnown RBP15.6■□□□□ 0.09
ARHGEF40-207ENST00000556399 CHEK2O96017 543 aa15.6■□□□□ 0.09
ARHGEF40-207ENST00000556399 ITGB3P05106 788 aa15.6■□□□□ 0.09
ARHGEF40-207ENST00000556399 Q3C1V9 767 aa15.6■□□□□ 0.09
ARHGEF40-207ENST00000556399 DPP9Q86TI2 863 aa15.6■□□□□ 0.09
ARHGEF40-207ENST00000556399 PPP2R3CQ969Q6 453 aa15.6■□□□□ 0.09
ARHGEF40-207ENST00000556399 ZNF669Q96BR6 464 aaPredicted RBP15.6■□□□□ 0.09
ARHGEF40-207ENST00000556399 SLITRK1Q96PX8 696 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms