RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
SLIRP-206ENST00000556375 GOLGA6L22H0YM25 854 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 DPYSL4O14531 572 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 P4HA2O15460 535 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 AP1G2O75843 785 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 FGFR1OPO95684 399 aaKnown RBP12.24□□□□□ -0.45
SLIRP-206ENST00000556375 F5P12259 2224 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 CCDC130P13994 396 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 CD58P19256 250 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 GDI1P31150 447 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 AVPR1AP37288 418 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 NUBP1P53384 320 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 USP46P62068 366 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 TXNDC8Q6A555 127 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 PAQR9Q6ZVX9 377 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 MON1AQ86VX9 555 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 TRIM59Q8IWR1 403 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 TMEM105Q8N8V8 129 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 MAB21L3Q8N8X9 362 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 SLC2A14Q8TDB8 520 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 WHAMMQ8TF30 809 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 SHDQ96IW2 340 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 PRRX2Q99811 253 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 ARID3AQ99856 593 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 SRRTQ9BXP5 876 aaKnown RBP12.24□□□□□ -0.45
SLIRP-206ENST00000556375 TRPV5Q9NQA5 729 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 CISHQ9NSE2 258 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 FAM49BQ9NUQ9 324 aa12.24□□□□□ -0.45
SLIRP-206ENST00000556375 TRAV19A0A0A6YYK7 116 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 ARNTLO00327 626 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 ZNF263O14978 683 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 CHADO15335 359 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 RTN3O95197 1032 aaPredicted RBP12.23□□□□□ -0.45
SLIRP-206ENST00000556375 CCDC192P0DO97 292 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 STARD6P59095 220 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 CETN1Q12798 172 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 CUL2Q13617 745 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 ZNF268Q14587 947 aaPredicted RBP12.23□□□□□ -0.45
SLIRP-206ENST00000556375 ARHGAP29Q52LW3 1261 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 SLC44A4Q53GD3 710 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 IER5LQ5T953 404 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 YAF2Q8IY57 180 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 NUP93Q8N1F7 819 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 CELF5Q8N6W0 485 aaKnown RBP12.23□□□□□ -0.45
SLIRP-206ENST00000556375 C12orf29Q8N999 325 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 BPIFB1Q8TDL5 484 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 SLITRK1Q96PX8 696 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 HNRNPABQ99729 332 aaKnown RBP12.23□□□□□ -0.45
SLIRP-206ENST00000556375 DDX23Q9BUQ8 820 aaKnown RBP12.23□□□□□ -0.45
SLIRP-206ENST00000556375 SMG9Q9H0W8 520 aaKnown RBP12.23□□□□□ -0.45
SLIRP-206ENST00000556375 CSNK1G1Q9HCP0 422 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 TRPM5Q9NZQ8 1165 aa12.23□□□□□ -0.45
SLIRP-206ENST00000556375 TNFRSF10BO14763 440 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 AFPP02771 609 aaKnown RBP12.22□□□□□ -0.45
SLIRP-206ENST00000556375 CKMP06732 381 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 USP17L7P0C7H9 530 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 FAM200BP0CF97 657 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 PFKLP17858 780 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 TBXAS1P24557 533 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-206ENST00000556375 PPP3CCP48454 512 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 PDE6CP51160 858 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 SLC5A3P53794 718 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 YWHAEP62258 255 aaKnown RBP12.22□□□□□ -0.45
SLIRP-206ENST00000556375 PLCB2Q00722 1185 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 USP4Q13107 963 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 DPCR1Q3MIW9 517 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 TPRG1Q6ZUI0 275 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 PDZD8Q8NEN9 1154 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 ZMIZ2Q8NF64 920 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 PJA1Q8NG27 643 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 OVCA2Q8WZ82 227 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 USP13Q92995 863 aaPredicted RBP12.22□□□□□ -0.45
SLIRP-206ENST00000556375 TATDN2Q93075 761 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 CYFIP2Q96F07 1278 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
SLIRP-206ENST00000556375 NT5C1BQ96P26 610 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 LRRC3BQ96PB8 259 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 MED15Q96RN5 788 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 KCNK16Q96T55 309 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 SMOQ99835 787 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 TRPC7Q9HCX4 862 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 HEBP1Q9NRV9 189 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 TDP1Q9NUW8 608 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 GCNT4Q9P109 453 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 CCL26Q9Y258 94 aa12.22□□□□□ -0.45
SLIRP-206ENST00000556375 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.22□□□□□ -0.45
SLIRP-206ENST00000556375 KANSL1LA0AUZ9 987 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 C2orf78A6NCI8 922 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 ZNF840PA6NDX5 716 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 STK25O00506 426 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 YWHAQP27348 245 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 ADORA2BP29275 332 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 RAD23BP54727 409 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 KCNH2Q12809 1159 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 IFRD2Q12894 506 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-206ENST00000556375 TAF10Q12962 218 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 ZNF394Q53GI3 561 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 CLEC20AQ6ZU45 233 aa12.21□□□□□ -0.45
SLIRP-206ENST00000556375 GPIHBP1Q8IV16 184 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms