RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 TRIP11Q15643 1979 aa11.25□□□□□ -0.61
TMEM260-206ENST00000555046 PLXNA4Q9HCM2 1894 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 LOC730098B7Z3J9 87 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 RTN3O95197 1032 aaPredicted RBP11.24□□□□□ -0.61
TMEM260-206ENST00000555046 FAM200BP0CF97 657 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 VDRP11473 427 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 RFX1P22670 979 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 PON1P27169 355 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 GBP2P32456 591 aaPredicted RBP11.24□□□□□ -0.61
TMEM260-206ENST00000555046 EPHA5P54756 1037 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 BPIFB4P59827 614 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 HSP90AA4PQ58FG1 418 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 TRIM65Q6PJ69 517 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 MYRFLQ96LU7 910 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 CRACR2AQ9BSW2 395 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 B3GNT5Q9BYG0 378 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 UBXN6Q9BZV1 441 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 DPEP3Q9H4B8 488 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 DMAP1Q9NPF5 467 aaPredicted RBP11.24□□□□□ -0.61
TMEM260-206ENST00000555046 IGSF9Q9P2J2 1179 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 EPS15L1Q9UBC2 864 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 HESX1Q9UBX0 185 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 APEX2Q9UBZ4 518 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 CDH7Q9ULB5 785 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 PCDHB4Q9Y5E5 795 aa11.24□□□□□ -0.61
TMEM260-206ENST00000555046 MED7O43513 233 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 VNN2O95498 520 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 MYL4P12829 197 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 LAMP2P13473 410 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 ZNF18P17022 549 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 DDX6P26196 483 aaKnown RBP eCLIP11.23□□□□□ -0.615e-6■■■■■ 46.6
TMEM260-206ENST00000555046 PDE6CP51160 858 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 KRT31Q15323 416 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 DDR2Q16832 855 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 ZNF394Q53GI3 561 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 SGO2Q562F6 1265 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 MIIPQ5JXC2 388 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 ARHGAP17Q68EM7 881 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 PHLDB3Q6NSJ2 640 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 TMEM270Q6UE05 265 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 DENND5BQ6ZUT9 1274 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 MTSS1LQ765P7 747 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 RRAGAQ7L523 313 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 RNF135Q8IUD6 432 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 NUP93Q8N1F7 819 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 AOPEPQ8N6M6 819 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 GIPC2Q8TF65 315 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 E2F7Q96AV8 911 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 TRMT2BQ96GJ1 504 aaKnown RBP11.23□□□□□ -0.61
TMEM260-206ENST00000555046 FUCA2Q9BTY2 467 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 VPS16Q9H269 839 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 CRISPLD1Q9H336 500 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 ATXN3LQ9H3M9 355 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 FBXO44Q9H4M3 255 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 PNPLA8Q9NP80 782 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 ZZEF1O43149 2961 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 KIAA1671Q9BY89 1806 aa11.23□□□□□ -0.61
TMEM260-206ENST00000555046 SLC38A8A6NNN8 435 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 F8VP50 259 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 LRRN2O75325 713 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 AP1G2O75843 785 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 KRT5P13647 590 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 CD19P15391 556 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 PFKLP17858 780 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 SLC9A1P19634 815 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 COPB1P53618 953 aaKnown RBP11.22□□□□□ -0.61
TMEM260-206ENST00000555046 RAD23BP54727 409 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 UBXN1Q04323 297 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 NCAPHQ15003 741 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 SPEGQ15772 3267 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 CNGA2Q16280 664 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 GET4Q7L5D6 327 aaPredicted RBP11.22□□□□□ -0.61
TMEM260-206ENST00000555046 FAM35AQ86V20 835 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 FMNL3Q8IVF7 1028 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 C12orf29Q8N999 325 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 ANKRD52Q8NB46 1076 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 SLC4A11Q8NBS3 891 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 PDZD8Q8NEN9 1154 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 SLC2A14Q8TDB8 520 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 WHAMMQ8TF30 809 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 OVCA2Q8WZ82 227 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 MRPS31Q92665 395 aaKnown RBP11.22□□□□□ -0.61
TMEM260-206ENST00000555046 FGF13Q92913 245 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 ELMO3Q96BJ8 720 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 PCMTD1Q96MG8 357 aaPredicted RBP11.22□□□□□ -0.61
TMEM260-206ENST00000555046 SLITRK1Q96PX8 696 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 DUSP16Q9BY84 665 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 ZNF518BQ9C0D4 1074 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 TSPY26PQ9H489 355 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 CSNK1G1Q9HCP0 422 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 PLCB1Q9NQ66 1216 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 TAB2Q9NYJ8 693 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 LIMD1Q9UGP4 676 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 MAGED2Q9UNF1 606 aaPredicted RBP11.22□□□□□ -0.61
TMEM260-206ENST00000555046 CNTN6Q9UQ52 1028 aa11.22□□□□□ -0.61
TMEM260-206ENST00000555046 SCN1AP35498 2009 aa11.21□□□□□ -0.61
TMEM260-206ENST00000555046 LGALS16A8MUM7 142 aa11.21□□□□□ -0.61
TMEM260-206ENST00000555046 C2CD4DB7Z1M9 353 aa11.21□□□□□ -0.61
TMEM260-206ENST00000555046 HCRTO43612 131 aa11.21□□□□□ -0.61
TMEM260-206ENST00000555046 SOAT2O75908 522 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms