RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PIK3C2BO00750 1634 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 KDM5AP29375 1690 aaKnown RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 PRXQ9BXM0 1461 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF785A8K8V0 405 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 RHPN2P1A8MT19 583 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 TBX3O15119 743 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 GPANK1O95872 356 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 FOSP01100 380 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 THP07101 528 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 SPATA31D3P0C874 917 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 FCER1AP12319 257 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 BRAFP15056 766 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 EN2P19622 333 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 CXCR5P32302 372 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 PIK3CBP42338 1070 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 ARFIP2P53365 341 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 AK2P54819 239 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 C21orf58P58505 322 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 FMO1Q01740 532 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 HABP2Q14520 560 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 LONRF1Q17RB8 773 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 STRIP1Q5VSL9 837 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 Q6ZNX1 250 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 SPATA31D4Q6ZUB0 917 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 RD3Q7Z3Z2 195 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 PCSK9Q8NBP7 692 aaKnown RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 SLC17A8Q8NDX2 589 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 NSUN7Q8NE18 718 aaKnown RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 OR6B3Q8NGW1 331 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 NUP133Q8WUM0 1156 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 PMM1Q92871 262 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 RNF31Q96EP0 1072 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 KLHL32Q96NJ5 620 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 RPS6KC1Q96S38 1066 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 MPHOSPH6Q99547 160 aaKnown RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 P2RX7Q99572 595 aaKnown RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 MYD88Q99836 296 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 ELAC2Q9BQ52 826 aaKnown RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 TLR10Q9BXR5 811 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 KRTAP4-3Q9BYR4 195 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 TRIM54Q9BYV2 358 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 IMPG2Q9BZV3 1241 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 REXO4Q9GZR2 422 aaKnown RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 GPR35Q9HC97 309 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 TMEM74BQ9NUR3 256 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 FOXJ2Q9P0K8 574 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 CPNE7Q9UBL6 633 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 MED16Q9Y2X0 877 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 LRP5O75197 1615 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 TROQ12816 1431 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-208ENST00000554785 MIA2Q96PC5 1412 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 PZPP20742 1482 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 NCOA2Q15596 1464 aa1.86□□□□□ -2.11
PRPF39-208ENST00000554785 LRRC3CA6NJW4 275 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 FOXN3O00409 490 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 BTN3A1O00481 513 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 TBC1D4O60343 1298 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 UNC5CO95185 931 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 CHEK2O96017 543 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 ERBB2P04626 1255 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 ZKSCAN1P17029 563 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 FDXRP22570 491 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 AVPR1BP47901 424 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 ALDH5A1P51649 535 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF135P52742 658 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 MXRA7P84157 204 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 MPP3Q13368 585 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF169Q14929 603 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 GEN1Q17RS7 908 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 ZNF783Q6ZMS7 281 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 USP37Q86T82 979 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 SRLQ86TD4 932 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 MORC1Q86VD1 984 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 FAM186BQ8IYM0 893 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 TMIEQ8NEW7 156 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 PTCD3Q96EY7 689 aaKnown RBP1.85□□□□□ -2.11
PRPF39-208ENST00000554785 BOD1Q96IK1 185 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 LRIG1Q96JA1 1093 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 SIK2Q9H0K1 926 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 RNPEPQ9H4A4 650 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 IL17RBQ9NRM6 502 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 SACM1LQ9NTJ5 587 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 CORO2BQ9UQ03 480 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 COX11Q9Y6N1 276 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 SPATA31A6Q5VVP1 1343 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 FAM135BQ49AJ0 1406 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 MED14O60244 1454 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 MYO1CO00159 1063 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 KPNA5O15131 536 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 DNAJB5O75953 348 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 GRPP07492 148 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 ELFN1P0C7U0 828 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 GATA3P23771 443 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 HTR3AP46098 478 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 TM4SF4P48230 202 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 PRIM2P49643 509 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 CASP5P51878 434 aa1.85□□□□□ -2.11
PRPF39-208ENST00000554785 VAV2P52735 878 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms