RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PDZD8Q8NEN9 1154 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 ITFG1Q8TB96 612 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 DNASE1L2Q92874 299 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 MAP4K1Q92918 833 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 CCDC74BQ96LY2 380 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 GAD1Q99259 594 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 RIT2Q99578 217 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 KXD1Q9BQD3 176 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 IL25Q9H293 177 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 EPB41L4BQ9H329 900 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 LMAN1LQ9HAT1 526 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 IFT122Q9HBG6 1241 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 AGPAT5Q9NUQ2 364 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 RBM28Q9NW13 759 aaKnown RBP5.37□□□□□ -1.55
ATXN3-229ENST00000554672 BARHL2Q9NY43 387 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 GDE1Q9NZC3 331 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 KLHL3Q9UH77 587 aa5.37□□□□□ -1.55
ATXN3-229ENST00000554672 KAT6AQ92794 2004 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 SPTBN2O15020 2390 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 ARL5CA6NH57 179 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 NOTOA8MTQ0 251 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 NPIPB6E9PJ23 425 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 CCL16O15467 120 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 GAS7O60861 476 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 STBD1O95210 358 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 MED14OSP0DP75 135 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 RPL17P18621 184 aaKnown RBP5.36□□□□□ -1.55
ATXN3-229ENST00000554672 NTHL1P78549 312 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 PCBP1Q15365 356 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATXN3-229ENST00000554672 MTERF2Q49AM1 385 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 UBXN11Q5T124 520 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 FUT10Q6P4F1 479 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 ATG14Q6ZNE5 492 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 REC114Q7Z4M0 266 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-229ENST00000554672 SGMS1Q86VZ5 419 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 LONP2Q86WA8 852 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 RAB11FIP4Q86YS3 637 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 RDM1Q8NG50 284 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 ELSPBP1Q96BH3 223 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 B3GALT6Q96L58 329 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 NLRP4Q96MN2 994 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 CEP89Q96ST8 783 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 KIF2CQ99661 725 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 TEKT3Q9BXF9 490 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 C6orf50Q9HD87 102 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 HEBP1Q9NRV9 189 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 MIOSQ9NXC5 875 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 DNMT3BQ9UBC3 853 aaKnown RBP5.36□□□□□ -1.55
ATXN3-229ENST00000554672 FBXW11Q9UKB1 542 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 ADAM28Q9UKQ2 775 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 GIT1Q9Y2X7 761 aa5.36□□□□□ -1.55
ATXN3-229ENST00000554672 MRPS23Q9Y3D9 190 aaKnown RBP5.36□□□□□ -1.55
ATXN3-229ENST00000554672 FNDC1Q4ZHG4 1894 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-229ENST00000554672 DMXL1Q9Y485 3027 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 KIAA1671Q9BY89 1806 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 ESYT2A0FGR8 921 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 TMEM8BA6NDV4 472 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 SLC22A31A6NKX4 558 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 SHISA7A6NL88 538 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 F8W810 466 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 MSH4O15457 936 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 ASAP2O43150 1006 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 CHMP2AO43633 222 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 UBOX5O94941 541 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 KCNK5O95279 499 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 TMEM253P0C7T8 217 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 ZNF806P0C7X5 589 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 SRGAP2CP0DJJ0 459 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 ZSCAN22P10073 491 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 CHMLP26374 656 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 GNA11P29992 359 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 AXLP30530 894 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 FNTBP49356 437 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 SCNN1GP51170 649 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 MLLT6P55198 1093 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 RAB33AQ14088 237 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 MPP2Q14168 576 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 NR0B2Q15466 257 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 UGCGQ16739 394 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 AASDHQ4L235 1098 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 PABPC1LQ4VXU2 614 aaKnown RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 AXDND1Q5T1B0 1012 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 STPG1Q5TH74 334 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 DIEXFQ68CQ4 756 aaKnown RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 TANGO2Q6ICL3 276 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 PDXDC1Q6P996 788 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 FBXL19Q6PCT2 694 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 PRSS55Q6UWB4 352 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 LRSAM1Q6UWE0 723 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 UNQ6494/PRO21346Q6UXR6 183 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 CEP68Q76N32 757 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 MIER3Q7Z3K6 550 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 HACE1Q8IYU2 909 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 SPEM1Q8N4L4 309 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 EXOC6Q8TAG9 804 aa5.35□□□□□ -1.55
ATXN3-229ENST00000554672 LNX1Q8TBB1 728 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 CCDC12Q8WUD4 166 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-229ENST00000554672 PRPF31Q8WWY3 499 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms