RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 FAM90A5PA8MXJ8 464 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 B4E171 279 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 E7ENX8 843 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 H0Y3Z8 333 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 CD3EAPO15446 510 aaKnown RBP4.45□□□□□ -1.7
TDP1-207ENST00000553617 RNASEH2AO75792 299 aaKnown RBP4.45□□□□□ -1.7
TDP1-207ENST00000553617 IPO13O94829 963 aaKnown RBP4.45□□□□□ -1.7
TDP1-207ENST00000553617 PRKCBP05771 671 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 PTMAP06454 111 aaKnown RBP4.45□□□□□ -1.7
TDP1-207ENST00000553617 FAM90A15PP0C7V4 464 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 FAM90A14PP0C7W9 464 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 CHRM3P20309 590 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 KLRK1P26718 216 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 ELF1P32519 619 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 RPS19P39019 145 aaKnown RBP4.45□□□□□ -1.7
TDP1-207ENST00000553617 TSPAN7P41732 249 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 GCLCP48506 637 aaPredicted RBP4.45□□□□□ -1.7
TDP1-207ENST00000553617 EPHB4P54760 987 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 LINC00310P59036 64 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 ACTR2P61160 394 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 PPP2CBP62714 309 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 PPP2CAP67775 309 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 TAP2Q03519 686 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 KRT17Q04695 432 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 MYO1EQ12965 1108 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 FHL3Q13643 280 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 GRM7Q14831 915 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 VMACQ2NL98 169 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 NBPF8Q3BBV2 869 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 CACHD1Q5VU97 1274 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 BBS12Q6ZW61 710 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 PLEKHH3Q7Z736 793 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 FAM124AQ86V42 546 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 HEATR4Q86WZ0 1026 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 RASGRP3Q8IV61 690 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 ELOA2Q8IYF1 753 aaPredicted RBP4.45□□□□□ -1.7
TDP1-207ENST00000553617 NRSN1Q8IZ57 195 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 Q8NA96 180 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 PCYOX1LQ8NBM8 494 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 OR6Y1Q8NGX8 325 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 ZNF483Q8TF39 744 aaPredicted RBP4.45□□□□□ -1.7
TDP1-207ENST00000553617 HTRA1Q92743 480 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 ZDHHC12Q96GR4 267 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 FAM84AQ96KN4 292 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 KCNC2Q96PR1 638 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 TWNKQ96RR1 684 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 LMF1Q96S06 567 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 PNKPQ96T60 521 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 MPHOSPH9Q99550 1183 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 INO80BQ9C086 356 aaPredicted RBP4.45□□□□□ -1.7
TDP1-207ENST00000553617 SMOC2Q9H3U7 446 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 CXorf36Q9H7Y0 433 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 ALG13Q9NP73 1137 aaKnown RBP4.45□□□□□ -1.7
TDP1-207ENST00000553617 FSCN3Q9NQT6 498 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 POGKQ9P215 609 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 DAPP1Q9UN19 280 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 SH3BP1Q9Y3L3 701 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 RAD54BQ9Y620 910 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 CLSPNQ9HAW4 1339 aa4.45□□□□□ -1.7
TDP1-207ENST00000553617 hCG_1984214I3L0E3 225 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 MFAP3LO75121 409 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 BAIAP3O94812 1187 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 SUN1O94901 812 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 VIPP01282 170 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 C1QTNF9P0C862 333 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 PPIFP30405 207 aaKnown RBP4.44□□□□□ -1.7
TDP1-207ENST00000553617 PXNP49023 591 aaPredicted RBP4.44□□□□□ -1.7
TDP1-207ENST00000553617 BCAT1P54687 386 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 NR1H2P55055 460 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 VAMP2P63027 116 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 ZNF844Q08AG5 666 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 GPS1Q13098 491 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 SURF1Q15526 300 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 ELAVL1Q15717 326 aaKnown RBP4.44□□□□□ -1.7
TDP1-207ENST00000553617 MAP3K21Q5TCX8 1036 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 ANKRD45Q5TZF3 282 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 VPS53Q5VIR6 699 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 NAIF1Q69YI7 327 aaPredicted RBP4.44□□□□□ -1.7
TDP1-207ENST00000553617 FAAH2Q6GMR7 532 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 MZT2BQ6NZ67 158 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 SLC30A10Q6XR72 485 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 HTR3DQ70Z44 454 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 RAB11FIP2Q7L804 512 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 ANKS1BQ7Z6G8 1248 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 NSUN7Q8NE18 718 aaKnown RBP4.44□□□□□ -1.7
TDP1-207ENST00000553617 CPT1CQ8TCG5 803 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 AFG1LQ8WV93 481 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 TMEM176AQ96HP8 235 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 ZNF668Q96K58 619 aaPredicted RBP4.44□□□□□ -1.7
TDP1-207ENST00000553617 LRRC37BQ96QE4 947 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 WDR24Q96S15 920 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 PTDSS2Q9BVG9 487 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 EPS8L2Q9H6S3 715 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 SEPSECSQ9HD40 501 aaKnown RBP4.44□□□□□ -1.7
TDP1-207ENST00000553617 G6PC2Q9NQR9 355 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 NRBP1Q9UHY1 535 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 FBXO2Q9UK22 296 aaPredicted RBP4.44□□□□□ -1.7
TDP1-207ENST00000553617 SLC30A1Q9Y6M5 507 aa4.44□□□□□ -1.7
TDP1-207ENST00000553617 ADM5C9JUS6 153 aa4.43□□□□□ -1.7
TDP1-207ENST00000553617 J3KTA2 159 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms