RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 NPEPPSP55786 919 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 GRB14Q14449 540 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 LSM12Q3MHD2 195 aaKnown RBP5.75□□□□□ -1.49
SCAF11-214ENST00000550893 OTUD7BQ6GQQ9 843 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 TMEM179Q6ZVK1 233 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 GPR142Q7Z601 462 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 STRA8Q7Z7C7 330 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 RASSF3Q86WH2 238 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 CHD1LQ86WJ1 897 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 TMPRSS6Q8IU80 811 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 LYSMD2Q8IV50 215 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 CACTINQ8WUQ7 758 aaKnown RBP5.75□□□□□ -1.49
SCAF11-214ENST00000550893 CEP95Q96GE4 821 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 ZNF512Q96ME7 567 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-214ENST00000550893 MOV10L1Q9BXT6 1211 aaKnown RBP5.75□□□□□ -1.49
SCAF11-214ENST00000550893 ZNF703Q9H7S9 590 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-214ENST00000550893 AURKAIP1Q9NWT8 199 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-214ENST00000550893 CEP72Q9P209 647 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 ARPP21Q9UBL0 812 aaPredicted RBP5.75□□□□□ -1.49
SCAF11-214ENST00000550893 KCNG1Q9UIX4 513 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 ANAPC4Q9UJX5 808 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 TMA7Q9Y2S6 64 aaKnown RBP5.75□□□□□ -1.49
SCAF11-214ENST00000550893 NOC2LQ9Y3T9 749 aaKnown RBP5.75□□□□□ -1.49
SCAF11-214ENST00000550893 RIPK3Q9Y572 518 aa5.75□□□□□ -1.49
SCAF11-214ENST00000550893 DDX49Q9Y6V7 483 aaKnown RBP5.75□□□□□ -1.49
SCAF11-214ENST00000550893 ATG2AQ2TAZ0 1938 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 XIRP2A4UGR9 3374 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 SCN5AQ14524 2016 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 CYR61O00622 381 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 NDUFB10O96000 172 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 SLPIP03973 132 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 HOXC6P09630 235 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 XPAP23025 273 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-214ENST00000550893 CCND3P30281 292 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-214ENST00000550893 GCLCP48506 637 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-214ENST00000550893 GPR15P49685 360 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 PRMT2P55345 433 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 ICA1Q05084 483 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 PPARAQ07869 468 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 STRN3Q13033 797 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 SPIDRQ14159 915 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 TRIM25Q14258 630 aaKnown RBP5.74□□□□□ -1.49
SCAF11-214ENST00000550893 ALX1Q15699 326 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 SLC9C1Q4G0N8 1177 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 ANKRD45Q5TZF3 282 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 CCDC62Q6P9F0 684 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 USP51Q70EK9 711 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 GSPT2Q8IYD1 628 aaKnown RBP5.74□□□□□ -1.49
SCAF11-214ENST00000550893 ELOA2Q8IYF1 753 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-214ENST00000550893 SPICE1Q8N0Z3 855 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 ARL8AQ96BM9 186 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 GCC1Q96CN9 775 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 SORCS2Q96PQ0 1159 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 TTC1Q99614 292 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 WNT8AQ9H1J5 351 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 SLKQ9H2G2 1235 aaPredicted RBP5.74□□□□□ -1.49
SCAF11-214ENST00000550893 IFT22Q9H7X7 185 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 SWAP70Q9UH65 585 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 PRSS50Q9UI38 385 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 RABGAP1Q9Y3P9 1069 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 CCDC171Q6TFL3 1326 aa5.74□□□□□ -1.49
SCAF11-214ENST00000550893 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 A0A1W2PR48 441 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 TNPO2O14787 897 aaKnown RBP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 WDR46O15213 610 aaKnown RBP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 ORC4O43929 436 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 ZEB2O60315 1214 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 NRP2O60462 931 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 FGAP02671 866 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 GJB1P08034 283 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 ZFYP08048 801 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 HSPD1P10809 573 aaKnown RBP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 CYBAP13498 195 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 MGAT5Q09328 741 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 PDCD1Q15116 288 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 CCDC178Q5BJE1 867 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 FAM47AQ5JRC9 791 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 PITRM1Q5JRX3 1037 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 FAM83BQ5T0W9 1011 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 MFSD5Q6N075 450 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 STOX1Q6ZVD7 989 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 TAS1R1Q7RTX1 841 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 SLC41A1Q8IVJ1 513 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 CLRN3Q8NCR9 226 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 SMCR8Q8TEV9 937 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 U2AF1L4Q8WU68 220 aaKnown RBP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 PAGR1Q9BTK6 254 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 FSD1Q9BTV5 496 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 ENKD1Q9H0I2 346 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 CHMP4BQ9H444 224 aaKnown RBP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 AS3MTQ9HBK9 375 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 TOPORSQ9NS56 1045 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 MTMR4Q9NYA4 1195 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 NYAP2Q9P242 653 aa5.73□□□□□ -1.49
SCAF11-214ENST00000550893 EVLQ9UI08 416 aaPredicted RBP5.73□□□□□ -1.49
SCAF11-214ENST00000550893 TET1Q8NFU7 2136 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 MYH7BA7E2Y1 1941 aa5.72□□□□□ -1.49
SCAF11-214ENST00000550893 VWA5AO00534 786 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms