RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 CYTH2Q99418 400 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 EPAS1Q99814 870 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 ECSITQ9BQ95 431 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 WDR83Q9BRX9 315 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 SPATA16Q9BXB7 569 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 XPNPEP1Q9NQW7 623 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 ZNRF3Q9ULT6 936 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 PPME1Q9Y570 386 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 WASF2Q9Y6W5 498 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 TCRBV5S1A1TA0A578 114 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 PI4K2BG5E9Z4 385 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 SGK1O00141 431 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 WNT10BO00744 389 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 MYL2P10916 166 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 ATF7P17544 494 aaPredicted RBP13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 MMP8P22894 467 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 ACOT2P49753 483 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 LIG4P49917 911 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 CDK7P50613 346 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 MSS51Q4VC12 460 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 FNBP1LQ5T0N5 605 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 TDRD10Q5VZ19 366 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 AAGABQ6PD74 315 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 SCUBE1Q8IWY4 988 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 TRIM42Q8IWZ5 723 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 NIPA2Q8N8Q9 360 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 EZH1Q92800 747 aaPredicted RBP13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 PPP2R3CQ969Q6 453 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 MRRFQ96E11 262 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 TMEM121Q9BTD3 319 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 NMUR2Q9GZQ4 415 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 POLR3FQ9H1D9 316 aaPredicted RBP13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 KLHL11Q9NVR0 708 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 RIPK3Q9Y572 518 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 IVNS1ABPQ9Y6Y0 642 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 COMMD3-BMI1R4GMX3 469 aa13.36□□□□□ -0.27
CALCOCO1-217ENST00000549935 PTPRJQ12913 1337 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 WDR81Q562E7 1941 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 B2RBV5 119 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 EXTL3O43909 919 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 FKBP6O75344 327 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 CSDE1O75534 798 aaKnown RBP13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 DGAT1O75907 488 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 STBD1O95210 358 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 C4BPAP04003 597 aaKnown RBP13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 NR3C2P08235 984 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 CCND2P30279 289 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 NLRP11P59045 1033 aaKnown RBP13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 MAP3K10Q02779 954 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 TAP1Q03518 808 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 CNPY1Q3B7I2 92 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 TMEM270Q6UE05 265 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 POLNQ7Z5Q5 900 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 TTC13Q8NBP0 860 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 STKLD1Q8NE28 680 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 FBXO36Q8NEA4 188 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 MCPH1Q8NEM0 835 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 RDM1Q8NG50 284 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 SLC44A1Q8WWI5 657 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 FAM161BQ96MY7 647 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 FAM210AQ96ND0 272 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 OLFM3Q96PB7 478 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 CENPKQ9BS16 269 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 RPAP3Q9H6T3 665 aaPredicted RBP13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
CALCOCO1-217ENST00000549935 BANF1O75531 89 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 SPAG6O75602 509 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 CIB2O75838 187 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 GNA15P30679 374 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 RPL26P61254 145 aaKnown RBP13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 PRKCEQ02156 737 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 ZNF252P-AS1Q0IIN9 211 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 CUL2Q13617 745 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 PIGHQ14442 188 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 PSMD6Q15008 389 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 LIN52Q52LA3 116 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 ANKRD22Q5VYY1 191 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 SMYD5Q6GMV2 418 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 TTC7BQ86TV6 843 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 VSIG10LQ86VR7 867 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 RHPN2Q8IUC4 686 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 CCDC60Q8IWA6 550 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 PALM2Q8IXS6 379 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 PDIK1LQ8N165 341 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 APBB2Q92870 758 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 ATG4CQ96DT6 458 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 CYP26B1Q9NR63 512 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 RNF146Q9NTX7 359 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 NDE1Q9NXR1 346 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 ARHGAP28Q9P2N2 729 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 TAGLN3Q9UI15 199 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 PCDHB4Q9Y5E5 795 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 DOCK5Q9H7D0 1870 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 ARID2Q68CP9 1835 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 C3orf70A6NLC5 250 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 VWA5AO00534 786 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 VNN1O95497 513 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 CALB1P05937 261 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 TCF4P15884 667 aa13.34□□□□□ -0.27
CALCOCO1-217ENST00000549935 BGNP21810 368 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms