RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 UBE2HP62256 183 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 TNNC1P63316 161 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 NTHL1P78549 312 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 TDGQ13569 410 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 STIM1Q13586 685 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 TAF12Q16514 161 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 SOWAHAQ2M3V2 549 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 EDRF1Q3B7T1 1238 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 WDR72Q3MJ13 1102 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 MGAT5BQ3V5L5 792 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 COBLL1Q53SF7 1204 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 INTS8Q75QN2 995 aaKnown RBP7.89□□□□□ -1.15
CPSF7-224ENST00000544990 MTSS1LQ765P7 747 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 ITIH5Q86UX2 942 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 ADGRF2Q8IZF7 708 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 ATAD1Q8NBU5 361 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 OR10T2Q8NGX3 314 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 SPATA20Q8TB22 786 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 ITFG1Q8TB96 612 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 RNF217Q8TC41 542 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 FGF13Q92913 245 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 SYAP1Q96A49 352 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-224ENST00000544990 FAM84AQ96KN4 292 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 TMEM209Q96SK2 561 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 RTP3Q9BQQ7 232 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 TIMMDC1Q9NPL8 285 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 ASAH2Q9NR71 780 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 GDE1Q9NZC3 331 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 YIPF1Q9Y548 306 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 PCDHB5Q9Y5E4 795 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 GPC6Q9Y625 555 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-224ENST00000544990 NOTCH4Q99466 2003 aa7.89□□□□□ -1.15
CPSF7-224ENST00000544990 TMEM221A6NGB7 291 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 LRRIQ3A6PVS8 624 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 M0R296 226 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 GABRDO14764 452 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 CETN3O15182 167 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 GADD45BO75293 160 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 VNN2O95498 520 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 FGF19O95750 216 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 C4BPAP04003 597 aaKnown RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 HAPLN1P10915 354 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 MYL4P12829 197 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 P4HA1P13674 534 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 WARSP23381 471 aaKnown RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 PRCPP42785 496 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 EIF1AXP47813 144 aaKnown RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 VAMP7P51809 220 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 MYL6P60660 151 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 FKBP3Q00688 224 aaKnown RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 ENPEPQ07075 957 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 VEPH1Q14D04 833 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 MAPRE1Q15691 268 aaKnown RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 ARSJQ5FYB0 599 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 ZNF667Q5HYK9 610 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 C4orf50Q6ZRC1 276 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 BMP8AQ7Z5Y6 402 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 DNAJB7Q7Z6W7 309 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 LRRTM3Q86VH5 581 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 FAM186BQ8IYM0 893 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 SMYD4Q8IYR2 804 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 ZNF295-AS1Q8N0V1 137 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 MCRS1Q96EZ8 462 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 CITED4Q96RK1 184 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 SEPT5Q99719 369 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 GPR88Q9GZN0 384 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 SNX25Q9H3E2 840 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 C11orf16Q9NQ32 467 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 ABI2Q9NYB9 513 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-224ENST00000544990 CEP72Q9P209 647 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 CDH9Q9ULB4 789 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 DUSP12Q9UNI6 340 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 C5orf42Q9H799 3197 aa7.88□□□□□ -1.15
CPSF7-224ENST00000544990 A0A1B0GTH6 734 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 ANKRD33BA6NCL7 494 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 ANHXE9PGG2 379 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 TNFRSF10BO14763 440 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 PSMA7O14818 248 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 STX10O60499 249 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 TACC1O75410 805 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 AKAP3O75969 853 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 PDGFRBP09619 1106 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 EPB41P11171 864 aaKnown RBP7.87□□□□□ -1.15
CPSF7-224ENST00000544990 TRIM21P19474 475 aaKnown RBP7.87□□□□□ -1.15
CPSF7-224ENST00000544990 ACAT1P24752 427 aaKnown RBP7.87□□□□□ -1.15
CPSF7-224ENST00000544990 GNL1P36915 607 aaPredicted RBP7.87□□□□□ -1.15
CPSF7-224ENST00000544990 EPHA5P54756 1037 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 RPL10AP62906 217 aaKnown RBP7.87□□□□□ -1.15
CPSF7-224ENST00000544990 DLG4P78352 724 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 LRRC63Q05C16 580 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 HTR4Q13639 388 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 SLC5A9Q2M3M2 681 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 SGSM1Q2NKQ1 1148 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 ZNF699Q32M78 642 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 ZACNQ401N2 412 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 ZCWPW2Q504Y3 356 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 PRSS36Q5K4E3 855 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 TDRD10Q5VZ19 366 aaKnown RBP7.87□□□□□ -1.15
CPSF7-224ENST00000544990 SCARA3Q6AZY7 606 aa7.87□□□□□ -1.15
CPSF7-224ENST00000544990 ISM2Q6H9L7 571 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms