RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 TSR1Q2NL82 804 aaKnown RBP12.43□□□□□ -0.42
SNHG1-221ENST00000544983 PABPC1LQ4VXU2 614 aaKnown RBP12.43□□□□□ -0.42
SNHG1-221ENST00000544983 PKDCCQ504Y2 493 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 RARS2Q5T160 578 aaKnown RBP12.43□□□□□ -0.42
SNHG1-221ENST00000544983 CYP4A22Q5TCH4 519 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 SFMBT2Q5VUG0 894 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 DENND5BQ6ZUT9 1274 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 DNAJB7Q7Z6W7 309 aaPredicted RBP12.43□□□□□ -0.42
SNHG1-221ENST00000544983 DRC7Q8IY82 874 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 NUP93Q8N1F7 819 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 TTC9BQ8N6N2 239 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 STK32AQ8WU08 396 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 TFAP2BQ92481 460 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 ZNF707Q96C28 371 aaPredicted RBP12.43□□□□□ -0.42
SNHG1-221ENST00000544983 MYRFLQ96LU7 910 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 NOX5Q96PH1 765 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 LPIN3Q9BQK8 851 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 FBXO44Q9H4M3 255 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 CYLDQ9NQC7 956 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 ASAH2Q9NR71 780 aa12.43□□□□□ -0.42
SNHG1-221ENST00000544983 SOBPA7XYQ1 873 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 GFPT2O94808 682 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 LSM8O95777 96 aaKnown RBP12.42□□□□□ -0.42
SNHG1-221ENST00000544983 GYPCP04921 128 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 ATF6P18850 670 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 BRD2P25440 801 aaKnown RBP12.42□□□□□ -0.42
SNHG1-221ENST00000544983 CDC25BP30305 580 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 ACADSBP45954 432 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 PLA2G4AP47712 749 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 MAP3K7CLP57077 242 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 DLX2Q07687 328 aaPredicted RBP12.42□□□□□ -0.42
SNHG1-221ENST00000544983 DDR2Q16832 855 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 CCDC142Q17RM4 750 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 GOLGA7BQ2TAP0 167 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 PPP1R2P3Q6NXS1 205 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 TMC5Q6UXY8 1006 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 TRIM72Q6ZMU5 477 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 CLEC20AQ6ZU45 233 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.42□□□□□ -0.42
SNHG1-221ENST00000544983 SLC47A2Q86VL8 602 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 CNGA4Q8IV77 575 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 EPS8L1Q8TE68 723 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 KCTD13Q8WZ19 329 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 OVCA2Q8WZ82 227 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 SUSD6Q92537 303 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 HSFY1Q96LI6 401 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 SMOQ99835 787 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 TTLL2Q9BWV7 592 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 MIS12Q9H081 205 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 WDR6Q9NNW5 1121 aaKnown RBP12.42□□□□□ -0.42
SNHG1-221ENST00000544983 IL37Q9NZH6 218 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 THEGQ9P2T0 379 aa12.42□□□□□ -0.42
SNHG1-221ENST00000544983 MYH10P35580 1976 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 NCANO14594 1321 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 CLUHO75153 1309 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 REV3LO60673 3130 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 FAM92AA1XBS5 289 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 LRRC53A6NM62 1247 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 SLC38A8A6NNN8 435 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 M0QYV0 167 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 TNFRSF10BO14763 440 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 CCL16O15467 120 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 AP5Z1O43299 807 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 CDC25CP30307 473 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 HNRNPH3P31942 346 aaKnown RBP12.41□□□□□ -0.42
SNHG1-221ENST00000544983 PRKCIP41743 596 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 CDR2Q01850 454 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 CBX2Q14781 532 aaPredicted RBP12.41□□□□□ -0.42
SNHG1-221ENST00000544983 ARID5BQ14865 1188 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 IRF2BP2Q7Z5L9 587 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 TTC30AQ86WT1 665 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 C12orf76Q8N812 135 aaPredicted RBP12.41□□□□□ -0.42
SNHG1-221ENST00000544983 TMEM35BQ8NCS4 154 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 MSANTD4Q8NCY6 345 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 PDZD8Q8NEN9 1154 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 OR8K1Q8NGG5 319 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 SLC35F5Q8WV83 523 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 ATXN2LQ8WWM7 1075 aaKnown RBP12.41□□□□□ -0.42
SNHG1-221ENST00000544983 DDX1Q92499 740 aaKnown RBP12.41□□□□□ -0.42
SNHG1-221ENST00000544983 SLITRK1Q96PX8 696 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 GCNAQ96QF7 691 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 KCNK16Q96T55 309 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 ZSWIM1Q9BR11 485 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 PDCL3Q9H2J4 239 aa12.41□□□□□ -0.42
SNHG1-221ENST00000544983 ZNHIT6Q9NWK9 470 aaKnown RBP12.41□□□□□ -0.42
SNHG1-221ENST00000544983 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNHG1-221ENST00000544983 ZFP37Q9Y6Q3 630 aaPredicted RBP12.41□□□□□ -0.42
SNHG1-221ENST00000544983 GOLGA6L6A8MZA4 724 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 H3BQ06 376 aaPredicted RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 SART1O43290 800 aaKnown RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 SOAT2O75908 522 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 FBXO21O94952 628 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 RHOP08100 348 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 PNMA6AP0CW24 399 aaPredicted RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 HMGA1P17096 107 aaKnown RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 PFKLP17858 780 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 YWHAQP27348 245 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 HOXD11P31277 338 aaPredicted RBP12.4□□□□□ -0.42
SNHG1-221ENST00000544983 CASP14P31944 242 aa12.4□□□□□ -0.42
SNHG1-221ENST00000544983 CDH5P33151 784 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms