RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 HNRNPCP07910 306 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS50-220ENST00000544910 PAEPP09466 180 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 CXCL8P10145 99 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 RBP3P10745 1247 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 CHRNB2P17787 502 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 PAMP19021 973 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 DRD4P21917 467 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 EIF4BP23588 611 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 RAD23BP54727 409 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 GRM1Q13255 1194 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 TAF12Q16514 161 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 SV2CQ496J9 727 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 FSCBQ5H9T9 825 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 ALLCQ8N6M5 410 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 C12orf50Q8NA57 414 aaPredicted RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 NUDCD1Q96RS6 583 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 SPATC1LQ9H0A9 340 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 FAM49BQ9NUQ9 324 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 CTNNAL1Q9UBT7 734 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 TMEM59LQ9UK28 342 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 DNPEPQ9ULA0 475 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 KIAA1257Q9ULG3 409 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 PIN4Q9Y237 131 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 MROH7Q68CQ1 1323 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 H0Y3Z8 333 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 NKRFO15226 690 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS50-220ENST00000544910 APRTP07741 180 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 ABHD2P08910 425 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 SNRPAP09012 282 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 UBA1P22314 1058 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 PTGIRP43119 386 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 CLCN3P51790 818 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 DNAJC3Q13217 504 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 TAF1BQ53T94 588 aaPredicted RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 RWDD4Q6NW29 188 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 CDR2LQ86X02 465 aaPredicted RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 SUGP1Q8IWZ8 645 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 CEP70Q8NHQ1 597 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 VPS11Q9H270 941 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 PCMTD2Q9NV79 361 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 NOCTQ9UK39 431 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 MAN1A2O60476 641 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 MAFO75444 373 aaPredicted RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 NOMO3P69849 1222 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 MRPS35P82673 323 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 PTPN11Q06124 597 aaPredicted RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 ZNF268Q14587 947 aaPredicted RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 TMEM132BQ14DG7 1078 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 TWF2Q6IBS0 349 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 MFSD7Q6UXD7 560 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 SIAH1Q8IUQ4 282 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 ADGRA3Q8IWK6 1321 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 EEF2KO00418 725 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 TARSP26639 723 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 EEF1DP29692 281 aaKnown RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 OCA2Q04671 838 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 BOLA3Q53S33 107 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 LRRC38Q5VT99 294 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 DCAF12L1Q5VU92 463 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 JADE1Q6IE81 842 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 PALB2Q86YC2 1186 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 ANKRD13AQ8IZ07 590 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 THEM5Q8N1Q8 247 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 TTC16Q8NEE8 873 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 PDZD8Q8NEN9 1154 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 GPRC5AQ8NFJ5 357 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 FAM193BQ96PV7 902 aaPredicted RBP6.03□□□□□ -1.44
VPS50-220ENST00000544910 BCAS3Q9H6U6 928 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 FZD1Q9UP38 647 aa6.03□□□□□ -1.44
VPS50-220ENST00000544910 PMM2O15305 246 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 PECAM1P16284 738 aaPredicted RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 FDFT1P37268 417 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 MMP13P45452 471 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ALDH18A1P54886 795 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 DGKDQ16760 1214 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 NOTUMQ6P988 496 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ABHD15Q6UXT9 468 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 MON1BQ7L1V2 547 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 RIOX2Q8IUF8 465 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 ZC3H15Q8WU90 426 aaKnown RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 PGBD4Q96DM1 585 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 KLF6Q99612 283 aaPredicted RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 NACA2Q9H009 215 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 MAF1Q9H063 256 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 MROH8Q9H579 483 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 PLEKHA5Q9HAU0 1116 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 COL24A1Q17RW2 1714 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 UBOX5O94941 541 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 KCNA2P16389 499 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 TPI1P60174 286 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 AP2B1P63010 937 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 JAG1P78504 1218 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 CNTN2Q02246 1040 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 CAPSQ13938 189 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 KCTD19Q17RG1 926 aaPredicted RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 MMEL1Q495T6 779 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 C1orf146Q5VVC0 180 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 C16orf87Q6PH81 154 aa6.02□□□□□ -1.45
VPS50-220ENST00000544910 RAB44Q7Z6P3 723 aaPredicted RBP6.02□□□□□ -1.45
VPS50-220ENST00000544910 ZSWIM2Q8NEG5 633 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 682.7 ms