RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 SMG9Q9H0W8 520 aaKnown RBP23.1■■□□□ 1.29
OTUB1-212ENST00000543988 SLC2A4RGQ9NR83 387 aa23.1■■□□□ 1.29
OTUB1-212ENST00000543988 SAMSN1Q9NSI8 373 aaKnown RBP23.1■■□□□ 1.29
OTUB1-212ENST00000543988 FBXL21Q9UKT6 434 aa23.1■■□□□ 1.29
OTUB1-212ENST00000543988 NFE2L3Q9Y4A8 694 aa23.1■■□□□ 1.29
OTUB1-212ENST00000543988 MYO10Q9HD67 2058 aa23.1■■□□□ 1.29
OTUB1-212ENST00000543988 PDGFBP01127 241 aaPredicted RBP23.09■■□□□ 1.29
OTUB1-212ENST00000543988 ACO1P21399 889 aaKnown RBP23.09■■□□□ 1.29
OTUB1-212ENST00000543988 DDX6P26196 483 aaKnown RBP eCLIP23.09■■□□□ 1.291e-7■■□□□ 14.2
OTUB1-212ENST00000543988 MAP3K7CLP57077 242 aa23.09■■□□□ 1.29
OTUB1-212ENST00000543988 GRM2Q14416 872 aa23.09■■□□□ 1.29
OTUB1-212ENST00000543988 MAN2A1Q16706 1144 aa23.09■■□□□ 1.29
OTUB1-212ENST00000543988 VITQ6UXI7 678 aa23.09■■□□□ 1.29
OTUB1-212ENST00000543988 RRAGAQ7L523 313 aa23.09■■□□□ 1.29
OTUB1-212ENST00000543988 MON1AQ86VX9 555 aa23.09■■□□□ 1.29
OTUB1-212ENST00000543988 MAB21L3Q8N8X9 362 aa23.09■■□□□ 1.29
OTUB1-212ENST00000543988 ENOX1Q8TC92 643 aaKnown RBP23.09■■□□□ 1.29
OTUB1-212ENST00000543988 CRACR2AQ9BSW2 395 aa23.09■■□□□ 1.29
OTUB1-212ENST00000543988 CSNK1G1Q9HCP0 422 aa23.09■■□□□ 1.29
OTUB1-212ENST00000543988 HEPACAM2A8MVW5 462 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 KCNJ18B7U540 433 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 TNFRSF10BO14763 440 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 SLC5A3P53794 718 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 GCNT1Q02742 428 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 IFRD2Q12894 506 aaPredicted RBP23.08■■□□□ 1.29
OTUB1-212ENST00000543988 KCNJ12Q14500 433 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 PPP1R26Q5T8A7 1209 aaPredicted RBP23.08■■□□□ 1.29
OTUB1-212ENST00000543988 CLEC20AQ6ZU45 233 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 CMTM8Q8IZV2 173 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 NUP93Q8N1F7 819 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 KREMEN1Q96MU8 473 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 TRPC7Q9HCX4 862 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 EHD2Q9NZN4 543 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 ZMYM5Q9UJ78 669 aa23.08■■□□□ 1.29
OTUB1-212ENST00000543988 WEE1P30291 646 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 TYRO3Q06418 890 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 TAF10Q12962 218 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 PHLDB3Q6NSJ2 640 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 BMP8AQ7Z5Y6 402 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 SIX5Q8N196 739 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 SCAMP5Q8TAC9 235 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 JAKMIP2Q96AA8 810 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 PBXIP1Q96AQ6 731 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 LRRC3BQ96PB8 259 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 WNT16Q9UBV4 365 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 CA14Q9ULX7 337 aa23.07■■□□□ 1.28
OTUB1-212ENST00000543988 C2orf78A6NCI8 922 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 RTN3O95197 1032 aaPredicted RBP23.06■■□□□ 1.28
OTUB1-212ENST00000543988 PRKCSHP14314 528 aaPredicted RBP23.06■■□□□ 1.28
OTUB1-212ENST00000543988 NPR3P17342 541 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 PSMC3P17980 439 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 YWHAQP27348 245 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 APBA1Q02410 837 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 MIIPQ5JXC2 388 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 CDKAL1Q5VV42 579 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 ARHGAP17Q68EM7 881 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 TRIM65Q6PJ69 517 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 TMEM270Q6UE05 265 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 GBP6Q6ZN66 633 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 GPRIN1Q7Z2K8 1008 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 DEPDC1BQ8WUY9 529 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 E2F7Q96AV8 911 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 SLC22A12Q96S37 553 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 TUBGCP2Q9BSJ2 902 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 TRMT61BQ9BVS5 477 aaKnown RBP23.06■■□□□ 1.28
OTUB1-212ENST00000543988 TRPM5Q9NZQ8 1165 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 CCL26Q9Y258 94 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 PCDHB4Q9Y5E5 795 aa23.06■■□□□ 1.28
OTUB1-212ENST00000543988 GTPBP10A4D1E9 387 aaKnown RBP23.05■■□□□ 1.28
OTUB1-212ENST00000543988 KRBA1A5PL33 1030 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 ZNF840PA6NDX5 716 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 SOBPA7XYQ1 873 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 HHLA1C9JL84 531 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 CD19P15391 556 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 SLC9A1P19634 815 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 EEF1GP26641 437 aaKnown RBP23.05■■□□□ 1.28
OTUB1-212ENST00000543988 AVPR1AP37288 418 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 EXOC3L4Q17RC7 722 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 KLHL40Q2TBA0 621 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 VWA3BQ502W6 1294 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 TCP11X2Q5H9J9 407 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 IER5LQ5T953 404 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 GJB7Q6PEY0 223 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 MFSD6LQ8IWD5 586 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 USP13Q92995 863 aaPredicted RBP23.05■■□□□ 1.28
OTUB1-212ENST00000543988 FBXO32Q969P5 355 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 SLITRK1Q96PX8 696 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 DUSP16Q9BY84 665 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 NDST4Q9H3R1 872 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 ARHGEF3Q9NR81 526 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 IL37Q9NZH6 218 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 ZDBF2Q9HCK1 2354 aa23.05■■□□□ 1.28
OTUB1-212ENST00000543988 TRAV19A0A0A6YYK7 116 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 DPYSL4O14531 572 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 GDI1P31150 447 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 ZNF132P52740 706 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 MYL5Q02045 173 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 GOLGA7BQ2TAP0 167 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 SGO2Q562F6 1265 aa23.04■■□□□ 1.28
OTUB1-212ENST00000543988 FBXL6Q8N531 539 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms