RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 COPS5Q92905 334 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 NCLNQ969V3 563 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 TSPAN17Q96FV3 270 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 UPF3AQ9H1J1 476 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 ATXN3LQ9H3M9 355 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CISHQ9NSE2 258 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 AMACRQ9UHK6 382 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 FBXL21Q9UKT6 434 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 APOBEC2Q9Y235 224 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 NFASCO94856 1347 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 ZNF263O14978 683 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 PYGLP06737 847 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 MAPTP10636 758 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 EIF4BP23588 611 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 TUFMP49411 452 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 FXR1P51114 621 aaKnown RBP eCLIP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 GJB7Q6PEY0 223 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ANKS3Q6ZW76 656 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 EPM2AIP1Q7L775 607 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 HERC6Q8IVU3 1022 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 RUBCNQ92622 972 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ZNF558Q96NG5 402 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ERGIC2Q96RQ1 377 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 CAMKK2Q96RR4 588 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 CYTH2Q99418 400 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 YIPF2Q9BWQ6 316 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 SLC13A1Q9BZW2 595 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 YY1AP1Q9H869 796 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 XAB2Q9HCS7 855 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 MROH1Q8NDA8 1641 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 SLITRK3O94933 977 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 COMTP21964 271 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 OXCT1P55809 520 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 CDR2Q01850 454 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 DMPKQ09013 629 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 BST2Q10589 180 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 CAPRIN1Q14444 709 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 MORF4L2Q15014 288 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ZSCAN26Q16670 478 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 CLEC17AQ6ZS10 378 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 SV2AQ7L0J3 742 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 PDCD7Q8N8D1 485 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 TMEM176AQ96HP8 235 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 PGLYRP2Q96PD5 576 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 GAD1Q99259 594 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 SERPINI1Q99574 410 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 TACO1Q9BSH4 297 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 TUBB6Q9BUF5 446 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 FTHL17Q9BXU8 183 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 COG4Q9H9E3 785 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ABCB6Q9NP58 842 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 HDAC6Q9UBN7 1215 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ZC3H7BQ9UGR2 993 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 C3P01024 1663 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 A0A0G2JND7 137 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 A0A1W2PQJ5 194 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 FOXP2O15409 715 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 DIAPH2O60879 1101 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ANXA9O76027 345 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ACADMP11310 421 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 TOB1P50616 345 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 PSMC6P62333 389 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 IRX1P78414 480 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 MTF1Q14872 753 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 MTFR1Q15390 333 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 FAAH2Q6GMR7 532 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ACAD10Q6JQN1 1059 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 MYO1HQ8N1T3 1032 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 LZICQ8WZA0 190 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 POP1Q99575 1024 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 PITPNM3Q9BZ71 974 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ZNF518BQ9C0D4 1074 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 RASSF4Q9H2L5 321 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 SENP1Q9P0U3 644 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 SCHIP1Q9P0W5 487 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 CNTNAP2Q9UHC6 1331 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 MED1Q15648 1581 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 LINC00854A0A1B0GVQ3 168 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 FOXN3O00409 490 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 RHOCP08134 193 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 TKTL1P51854 596 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 RBBP7Q16576 425 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 FSCBQ5H9T9 825 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ANKRD23Q86SG2 305 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 UNC45BQ8IWX7 931 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 SAMD14Q8IZD0 417 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 CCDC124Q96CT7 223 aaKnown RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 MFSD1Q9H3U5 465 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 UXTQ9UBK9 157 aaPredicted RBP7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 CDY2AQ9Y6F7 541 aa7.17□□□□□ -1.26
SRGAP1-206ENST00000543397 ARHGAP10A1A4S6 786 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 PPP1R3GB7ZBB8 358 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 PMPCBO75439 489 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 MMEP08473 750 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 ESRRAP11474 423 aaPredicted RBP7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 CTNNB1P35222 781 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 PTGER2P43116 358 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 RAP1GAPP47736 663 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 PHEXP78562 749 aa7.16□□□□□ -1.26
SRGAP1-206ENST00000543397 NR1I3Q14994 352 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms