RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 NFICP08651 508 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 PSMC2P35998 433 aaKnown RBP9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 CASP4P49662 377 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 PMS1P54277 932 aaKnown RBP9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 CLDN10P78369 228 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 RUNX3Q13761 415 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 TMEM132DQ14C87 1099 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 VEPH1Q14D04 833 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 NFKBIBQ15653 356 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 UAP1L1Q3KQV9 507 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 DPCR1Q3MIW9 517 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 MGAT5BQ3V5L5 792 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 PLK5Q496M5 336 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 SH3PXD2AQ5TCZ1 1133 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 CEP135Q66GS9 1140 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 TRIM68Q6AZZ1 485 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 KLHL10Q6JEL2 608 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 FSTL4Q6MZW2 842 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 KIAA1211LQ6NV74 962 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 SASS6Q6UVJ0 657 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 GAREM2Q75VX8 874 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 ITIH5Q86UX2 942 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 WDR49Q8IV35 697 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 EFCAB13Q8IY85 973 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 TTC9BQ8N6N2 239 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 RDH13Q8NBN7 331 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 ATAD1Q8NBU5 361 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 BEST2Q8NFU1 509 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 TMC2Q8TDI7 906 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 PARD3BQ8TEW8 1205 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 NOC3LQ8WTT2 800 aaKnown RBP9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 CACTINQ8WUQ7 758 aaKnown RBP9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 PSMG2Q969U7 264 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 FNBP1Q96RU3 617 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 ADAM33Q9BZ11 813 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 EBF3Q9H4W6 596 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 TASP1Q9H6P5 420 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 PDE11AQ9HCR9 933 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 OBP2AQ9NY56 170 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 RWDD2AQ9UIY3 292 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 TSC2P49815 1807 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 KIAA1549LQ6ZVL6 1849 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 OBSL1O75147 1896 aa9.32□□□□□ -0.92
CLSTN3-212ENST00000541770 CFAP47Q6ZTR5 3102 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 CCDC163A0A0D9SF12 145 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 ANO9A1A5B4 782 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 OR6C75A6NL08 312 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 KHNYNO15037 678 aaKnown RBP9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 SLC16A3O15427 465 aaKnown RBP9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 AKAP3O75969 853 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 OAZ2O95190 189 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 FGF19O95750 216 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 PAX3P23760 479 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 ERCC5P28715 1186 aaPredicted RBP9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 GUCY2FP51841 1108 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 DGKEP52429 567 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 AP3M2P53677 418 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 WNT7BP56706 349 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 BFSP1Q12934 665 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 GPR17Q13304 367 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 DUOXA2Q1HG44 320 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 OVOS1Q6IE37 1185 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 CC2D1AQ6P1N0 951 aaPredicted RBP9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 INTS8Q75QN2 995 aaKnown RBP9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 FILIP1Q7Z7B0 1213 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 FAM186BQ8IYM0 893 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 CAMKK1Q8N5S9 505 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 RPLP0P6Q8NHW5 317 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 GIPC2Q8TF65 315 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 ANKRD36BP1Q96IX9 119 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 ZC3H10Q96K80 434 aaKnown RBP9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 CGRRF1Q99675 332 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 DUSP9Q99956 384 aaKnown RBP9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 SCNM1Q9BWG6 230 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 OXCT2Q9BYC2 517 aaPredicted RBP9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 GZF1Q9H116 711 aaPredicted RBP9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 DUSP15Q9H1R2 295 aaPredicted RBP9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 INTS13Q9NVM9 706 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 ANO10Q9NW15 660 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 CTNND2Q9UQB3 1225 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 ASB3Q9Y575 518 aa9.31□□□□□ -0.92
CLSTN3-212ENST00000541770 M0QZQ0 153 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 TULP1O00294 542 aaPredicted RBP9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 PIRO00625 290 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 IKBKBO14920 756 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 FGFR1OPO95684 399 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 GNA14O95837 355 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 TMEM191BP0C7N4 346 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 DLATP10515 647 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 EPB41P11171 864 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 KRT13P13646 458 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 ARSAP15289 507 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 CDC25CP30307 473 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 AVPR1AP37288 418 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 GALK1P51570 392 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 STX17P56962 302 aa9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 TFAMQ00059 246 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-212ENST00000541770 AMPD2Q01433 879 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms